RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 COMMD7Q86VX2 200 aa9.15□□□□□ -0.94
DDX39A-219ENST00000592927 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.94
DDX39A-219ENST00000592927 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.94
DDX39A-219ENST00000592927 GATAD1Q8WUU5 269 aa9.15□□□□□ -0.94
DDX39A-219ENST00000592927 MARC2Q969Z3 335 aa9.15□□□□□ -0.94
DDX39A-219ENST00000592927 RCC1LQ96I51 464 aaKnown RBP9.15□□□□□ -0.94
DDX39A-219ENST00000592927 HRH4Q9H3N8 390 aa9.15□□□□□ -0.94
DDX39A-219ENST00000592927 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
DDX39A-219ENST00000592927 ANKRD34BA5PLL1 514 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 I3L521 148 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 CCL24O00175 119 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 TOMM40O96008 361 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 PF4P02776 101 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 MYCNOSP40205 109 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 PLP1P60201 277 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 ZNF90Q03938 601 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 FAM122CQ6P4D5 195 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 S100A7AQ86SG5 101 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 SLC7A5P1Q8MH63 180 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 OR1N2Q8NGR9 330 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 DPF1Q92782 380 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
DDX39A-219ENST00000592927 DNAJC4Q9NNZ3 241 aa9.14□□□□□ -0.95
DDX39A-219ENST00000592927 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
DDX39A-219ENST00000592927 NUPL2O15504 423 aaKnown RBP9.13□□□□□ -0.95
DDX39A-219ENST00000592927 IGHV3-23P01764 117 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 HSPB1P04792 205 aaKnown RBP9.13□□□□□ -0.95
DDX39A-219ENST00000592927 OR5G3P0C626 314 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 RD3LP0DJH9 198 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 GATA2P23769 480 aaPredicted RBP9.13□□□□□ -0.95
DDX39A-219ENST00000592927 PMS2P11Q13670 270 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 TIGITQ495A1 244 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 OR11H1Q8NG94 326 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 OR51G1Q8NGK1 321 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 Q8WTZ3 238 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 RAB24Q969Q5 203 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 RAX2Q96IS3 184 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 DUX3Q96PT4 197 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
DDX39A-219ENST00000592927 S4R3C0 116 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
DDX39A-219ENST00000592927 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 A0A087WW49 117 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
DDX39A-219ENST00000592927 LINC01619G3V211 115 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 COX7A2P2O60397 106 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 PSG1P11464 419 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 S100A7P31151 101 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 PPT1P50897 306 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 TAS2R45P59539 299 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 C10orf113Q5VZT2 155 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 LCN15Q6UWW0 184 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 PBDC1Q9BVG4 233 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 SMDT1Q9H4I9 107 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 FUT9Q9Y231 359 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 HYDINQ4G0P3 5121 aa9.12□□□□□ -0.95
DDX39A-219ENST00000592927 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 OR2T8A6NH00 312 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 TGOLN2O43493 480 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 HYPMO75409 117 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 OR2C1O95371 312 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 IFNA1P01562 189 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 TRBV12-3P01733 135 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 CTSGP08311 255 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 GPR183P32249 361 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 TAGLN2P37802 199 aaKnown RBP9.11□□□□□ -0.95
DDX39A-219ENST00000592927 PSMB3P49720 205 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 CLEC19AQ6UXS0 136 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 SSX7Q7RTT5 188 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 CCDC140Q96MF4 163 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 FAM210AQ96ND0 272 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 RNF24Q9Y225 148 aa9.11□□□□□ -0.95
DDX39A-219ENST00000592927 K7EIL1 84 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 CXorf1O96002 111 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 CLEC3BP05452 202 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 ORM2P19652 201 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 ZP3P21754 424 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 ARL3P36405 182 aa9.1□□□□□ -0.95
DDX39A-219ENST00000592927 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
DDX39A-219ENST00000592927 FHL3Q13643 280 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms