RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 LHFPL1Q86WI0 220 aa11.29□□□□□ -0.6
DDX39A-216ENST00000591275 OR13C8Q8NGS7 320 aa11.29□□□□□ -0.6
DDX39A-216ENST00000591275 ZNF431Q8TF32 576 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-216ENST00000591275 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-216ENST00000591275 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
DDX39A-216ENST00000591275 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
DDX39A-216ENST00000591275 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
DDX39A-216ENST00000591275 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 M0QYG6 137 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 IGLC1P0CG04 106 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 PGAM2P15259 253 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 RND2P52198 227 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 UCP3P55916 312 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 DHODHQ02127 395 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-216ENST00000591275 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 TMEM88Q6PEY1 159 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 OR11H7Q8NGC8 314 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 Q8WTZ3 238 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 GPR132Q9UNW8 380 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
DDX39A-216ENST00000591275 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 IL4P05112 153 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 GIPP09681 153 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-216ENST00000591275 OR4E1P0C645 316 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 OR10J1P30954 320 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 RAP2BP61225 183 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
DDX39A-216ENST00000591275 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
DDX39A-216ENST00000591275 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
DDX39A-216ENST00000591275 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-216ENST00000591275 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
DDX39A-216ENST00000591275 PRSS54Q6PEW0 395 aa11.26□□□□□ -0.61
DDX39A-216ENST00000591275 OR1S2Q8NGQ3 325 aa11.26□□□□□ -0.61
DDX39A-216ENST00000591275 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
DDX39A-216ENST00000591275 TMED3Q9Y3Q3 217 aa11.26□□□□□ -0.61
DDX39A-216ENST00000591275 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 BUB3O43684 328 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-216ENST00000591275 PIGPP57054 158 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 SP6Q3SY56 376 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 SCGB2B2Q4G0G5 96 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 TMEM128Q5BJH2 165 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 GSG1LQ6UXU4 331 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-216ENST00000591275 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 RNASE11Q8TAA1 199 aaKnown RBP11.25□□□□□ -0.61
DDX39A-216ENST00000591275 ZFAND1Q8TCF1 268 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
DDX39A-216ENST00000591275 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
DDX39A-216ENST00000591275 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 RGS13O14921 159 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 ATG12O94817 140 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 CXCL3P19876 107 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 RND3P61587 244 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 DAD1P61803 113 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 C4orf46Q504U0 113 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 Q8N1X5 172 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 ZNF709Q8N972 641 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 SEC22CQ9BRL7 303 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
DDX39A-216ENST00000591275 SAV1Q9H4B6 383 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-216ENST00000591275 PAIP2BQ9ULR5 123 aaKnown RBP11.24□□□□□ -0.61
DDX39A-216ENST00000591275 HERC1Q15751 4861 aa11.23□□□□□ -0.61
DDX39A-216ENST00000591275 HBE1P02100 147 aa11.23□□□□□ -0.61
DDX39A-216ENST00000591275 HTR2BP41595 481 aa11.23□□□□□ -0.61
DDX39A-216ENST00000591275 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
DDX39A-216ENST00000591275 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-216ENST00000591275 MGAT4CQ9UBM8 478 aa11.23□□□□□ -0.61
DDX39A-216ENST00000591275 GOLT1BQ9Y3E0 138 aa11.23□□□□□ -0.61
DDX39A-216ENST00000591275 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 C9orf170A2RU37 121 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 NXPH3O95157 252 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
DDX39A-216ENST00000591275 RD3LP0DJH9 198 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 SLC25A4P12235 298 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 FAM3BP58499 235 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-216ENST00000591275 SPCS3P61009 180 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 NPIPB3Q92617 1050 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
DDX39A-216ENST00000591275 DMBT1Q9UGM3 2413 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-216ENST00000591275 F6UB75 175 aa11.21□□□□□ -0.61
DDX39A-216ENST00000591275 TOMM40O96008 361 aa11.21□□□□□ -0.61
DDX39A-216ENST00000591275 CYCSP99999 105 aaKnown RBP11.21□□□□□ -0.61
DDX39A-216ENST00000591275 FGL1Q08830 312 aa11.21□□□□□ -0.61
DDX39A-216ENST00000591275 RRN3P1Q2M238 152 aa11.21□□□□□ -0.61
DDX39A-216ENST00000591275 C2orf83Q53S99 150 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms