RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 AURKAIP1Q9NWT8 199 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-215ENST00000584944 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 HIGD1AQ9Y241 93 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 WDR83OSQ9Y284 106 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 BORCS7-ASMTA0A0B4J1R7 106 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 ARPC5O15511 151 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 GATA2P23769 480 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-215ENST00000584944 ZNF266Q14584 549 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 AKAP14Q86UN6 197 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 OR8I2Q8N0Y5 310 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 PRR25Q96S07 402 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 RNF2Q99496 336 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 SLC25A22Q9H936 323 aa10.48□□□□□ -0.73
TRAF4-215ENST00000584944 TFPI2P48307 235 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 ADAMTSL5Q6ZMM2 481 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 STPG3Q8N7X2 389 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 STXBP6Q8NFX7 210 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 OR1L4Q8NGR5 311 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 AQP10Q96PS8 301 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 PFDN5Q99471 154 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 MGST2Q99735 147 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 SPAG8Q99932 426 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-215ENST00000584944 SLC45A2Q9UMX9 530 aa10.47□□□□□ -0.73
TRAF4-215ENST00000584944 LSM4Q9Y4Z0 139 aaKnown RBP10.47□□□□□ -0.73
TRAF4-215ENST00000584944 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-215ENST00000584944 SMLR1H3BR10 107 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-215ENST00000584944 CD81P60033 236 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 B2MP61769 119 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 Q5BKY6 102 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 C1orf194Q5T5A4 169 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 C10orf113Q5VZT2 155 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 CHAC2Q8WUX2 184 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 GPR82Q96P67 336 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 NPCDR1Q9BY65 106 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 MFFQ9GZY8 342 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 VSIRQ9H7M9 311 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 PXMP4Q9Y6I8 212 aa10.46□□□□□ -0.73
TRAF4-215ENST00000584944 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.74
TRAF4-215ENST00000584944 KMT2CQ8NEZ4 4911 aaKnown RBP10.45□□□□□ -0.74
TRAF4-215ENST00000584944 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 TSPAN4O14817 238 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 GALR1P47211 349 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 RPL29P47914 159 aaKnown RBP10.45□□□□□ -0.74
TRAF4-215ENST00000584944 MIC13Q5XKP0 118 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 WFDC3Q8IUB2 231 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 WDR61Q9GZS3 305 aaKnown RBP10.45□□□□□ -0.74
TRAF4-215ENST00000584944 TUBA4BQ9H853 241 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 SLC39A9Q9NUM3 307 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
TRAF4-215ENST00000584944 ZNF785A8K8V0 405 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 BUB3O43684 328 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 PFDN1O60925 122 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-215ENST00000584944 CMC4P56277 68 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-215ENST00000584944 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-215ENST00000584944 ARV1Q9H2C2 271 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
TRAF4-215ENST00000584944 NBEAL2Q6ZNJ1 2754 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 TAAR5O14804 337 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 RPL7P18124 248 aaKnown RBP10.43□□□□□ -0.74
TRAF4-215ENST00000584944 OPCMLQ14982 345 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 TMEM182Q6ZP80 229 aaPredicted RBP10.43□□□□□ -0.74
TRAF4-215ENST00000584944 LINC00305Q7Z4B0 112 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 LRRC20Q8TCA0 184 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 NEURL2Q9BR09 285 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 SMAD5-AS1Q9Y6J3 95 aa10.43□□□□□ -0.74
TRAF4-215ENST00000584944 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 ZNF98A6NK75 572 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 ID1P41134 155 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 PLP1P60201 277 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 SNRPD3P62318 126 aaKnown RBP10.42□□□□□ -0.74
TRAF4-215ENST00000584944 FFAR4Q5NUL3 377 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 HSD17B11Q8NBQ5 300 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 GATAD1Q8WUU5 269 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 ZNF414Q96IQ9 312 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 UHRF2Q96PU4 802 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 SHANK2-AS3Q9BTD1 123 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 RSG1Q9BU20 258 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 SCRT1Q9BWW7 348 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 PARD6GQ9BYG4 376 aaPredicted RBP10.42□□□□□ -0.74
TRAF4-215ENST00000584944 NRN1Q9NPD7 142 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 U3KQE9 123 aa10.42□□□□□ -0.74
TRAF4-215ENST00000584944 COL7A1Q02388 2944 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 A0A0D9SG52 128 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 OR11H12B2RN74 326 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 K7EIL1 84 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 JTBO76095 146 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 MEOX2P50222 304 aa10.41□□□□□ -0.74
TRAF4-215ENST00000584944 LEMD1Q68G75 181 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms