RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 TRAV10A0A0B4J240 114 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 IGHV4-28A0A0C4DH34 117 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 PRSS46E5RG02 174 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 FNDC10F2Z333 226 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 L7N2F9 121 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 DNASE2O00115 360 aaPredicted RBP9.84□□□□□ -0.83
SS18-222ENST00000582792 GNG7O60262 68 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 SIX6O95475 246 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 RLN2P04090 185 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 RBMY1A1P0DJD3 496 aaKnown RBP9.84□□□□□ -0.83
SS18-222ENST00000582792 RBMY1CP0DJD4 496 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 HLA-DMBP28068 263 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 H2BFSP57053 126 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 VAMP2P63027 116 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 RAB32Q13637 225 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 RBMY1FQ15415 496 aaKnown RBP9.84□□□□□ -0.83
SS18-222ENST00000582792 PRSS54Q6PEW0 395 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 ST8SIA2Q92186 375 aa9.84□□□□□ -0.83
SS18-222ENST00000582792 LSM5Q9Y4Y9 91 aaKnown RBP9.84□□□□□ -0.83
SS18-222ENST00000582792 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 PMS2P5A8MQ11 134 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 IGHV3-48P01763 117 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 APOHP02749 345 aaPredicted RBP9.83□□□□□ -0.84
SS18-222ENST00000582792 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
SS18-222ENST00000582792 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 MIFP14174 115 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 MLANAQ16655 118 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 TMEM41BQ5BJD5 291 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 TOMM20LQ6UXN7 152 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 Q6ZTC4 211 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 STHQ8IWL8 128 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 LILRB2Q8N423 598 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 FAM24BQ8N5W8 94 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 OR1S2Q8NGQ3 325 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 GGACTQ9BVM4 153 aa9.83□□□□□ -0.84
SS18-222ENST00000582792 E5RGE8 158 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 PET100P0DJ07 73 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 S100A10P60903 97 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 FCN2Q15485 313 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 ZNF600Q6ZNG1 722 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 TRPT1Q86TN4 253 aaKnown RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 OR10P1Q8NGE3 313 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 RNF126Q9BV68 326 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 LYRM2Q9NU23 88 aaPredicted RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 MRPL36Q9P0J6 103 aaKnown RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
SS18-222ENST00000582792 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
SS18-222ENST00000582792 IGHV3-66A0A0C4DH42 116 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 ZNF705EA8MWA4 302 aaPredicted RBP9.81□□□□□ -0.84
SS18-222ENST00000582792 H3BP45 60 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 SPP1P10451 314 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 OR10J1P30954 320 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 P2RY1P47900 373 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 RND2P52198 227 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
SS18-222ENST00000582792 DLK1P80370 383 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 GAMTQ14353 236 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 MORN3Q6PF18 240 aaPredicted RBP9.81□□□□□ -0.84
SS18-222ENST00000582792 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 OR11H7Q8NGC8 314 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 PPP1R1CQ8WVI7 109 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 NPIPB3Q92617 1050 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 X6R8D5 127 aa9.81□□□□□ -0.84
SS18-222ENST00000582792 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
SS18-222ENST00000582792 MPC2O95563 127 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 GIPP09681 153 aaPredicted RBP9.8□□□□□ -0.84
SS18-222ENST00000582792 CXCL3P19876 107 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 C4BPBP20851 252 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 BCAP31P51572 246 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 TRGV9Q99603 122 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 SLC25A31Q9H0C2 315 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 TMEM231Q9H6L2 316 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 RABAC1Q9UI14 185 aa9.8□□□□□ -0.84
SS18-222ENST00000582792 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
SS18-222ENST00000582792 AGRNO00468 2067 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 PRSS29PA6NIE9 313 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 H0YIZ8 118 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 K7EQG2 157 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 AMBPP02760 352 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 FABP1P07148 127 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 METTL15P1P0C7V9 234 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 SULT1A1P50225 295 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 CAV2P51636 162 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 FGL1Q08830 312 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 ATP6V1FQ16864 119 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 ACOT7LQ6ZUV0 252 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 TMEM252Q8N6L7 170 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 ACY3Q96HD9 319 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 GRAMD2BQ96HH9 432 aa9.79□□□□□ -0.84
SS18-222ENST00000582792 MUC4Q99102 2169 aa9.78□□□□□ -0.84
SS18-222ENST00000582792 A0A1W2PS18 150 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms