RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR2G3Q8NGZ4 309 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 WWC2-AS2Q96NR7 200 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 SLC45A2Q9UMX9 530 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 UFC1Q9Y3C8 167 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 TMEM213A2RRL7 107 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 ZFP92A6NM28 416 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 GNG7O60262 68 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 RPL29P47914 159 aaKnown RBP10.92□□□□□ -0.66
COMMD4-225ENST00000569245 CD81P60033 236 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 SERF2P84101 59 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 IFITM2Q01629 132 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 RSG1Q9BU20 258 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 SH3BGRL3Q9H299 93 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 SLC25A32Q9H2D1 315 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 ZMAT4Q9H898 229 aa10.92□□□□□ -0.66
COMMD4-225ENST00000569245 A8MWP6 167 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 IFNA7P01567 189 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 IGKV1-17P01599 117 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 CTSGP08311 255 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 SELENOTP62341 195 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 PRR20EP86478 221 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 PRR20CP86479 221 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 PRR20DP86480 221 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 PRR20BP86481 221 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 PRR20AP86496 221 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 ZNF680Q8NEM1 530 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 MARC2Q969Z3 335 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 CHRDL1Q9BU40 450 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 C20orf24Q9BUV8 137 aa10.91□□□□□ -0.66
COMMD4-225ENST00000569245 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 NUPL2O15504 423 aaKnown RBP10.9□□□□□ -0.66
COMMD4-225ENST00000569245 FABP1P07148 127 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 LINC00869P0C866 280 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 ADMP35318 185 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 ELLP55199 621 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-225ENST00000569245 YPEL3P61236 119 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-225ENST00000569245 ZNF90Q03938 601 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 TIGITQ495A1 244 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 RBPMS2Q6ZRY4 209 aaKnown RBP10.9□□□□□ -0.66
COMMD4-225ENST00000569245 TMED6Q8WW62 240 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 C19orf73Q9NVV2 129 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
COMMD4-225ENST00000569245 MLXQ9UH92 298 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 PXMP4Q9Y6I8 212 aa10.9□□□□□ -0.66
COMMD4-225ENST00000569245 IGHV3OR16-8A0A075B7F1 116 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 A8MZ25 164 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 NDUFA4O00483 81 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 YIF1AO95070 293 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 TOMM40O96008 361 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 B2MP61769 119 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 RELQ04864 619 aaPredicted RBP10.89□□□□□ -0.67
COMMD4-225ENST00000569245 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 ALKAL2Q6UX46 152 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
COMMD4-225ENST00000569245 ZNF767PQ75MW2 155 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 STPG3Q8N7X2 389 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 BPIFCQ8NFQ6 507 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 TMEM190Q8WZ59 177 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 TENM3Q9P273 2699 aa10.89□□□□□ -0.67
COMMD4-225ENST00000569245 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 RGS13O14921 159 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
COMMD4-225ENST00000569245 MBP02144 154 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 CD7P09564 240 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 PSG1P11464 419 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 SULT1A2P50226 295 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 RAB5CP51148 216 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 PLP1P60201 277 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 FFAR4Q5NUL3 377 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 DEFB125Q8N687 156 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
COMMD4-225ENST00000569245 UBQLN2Q9UHD9 624 aa10.88□□□□□ -0.67
COMMD4-225ENST00000569245 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 C8orf88P0DMB2 117 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
COMMD4-225ENST00000569245 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 ZNF600Q6ZNG1 722 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 Q6ZRG5 221 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 OR51G1Q8NGK1 321 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 Q8WTZ3 238 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 ZNF414Q96IQ9 312 aa10.87□□□□□ -0.67
COMMD4-225ENST00000569245 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
COMMD4-225ENST00000569245 M6PRP20645 277 aa10.86□□□□□ -0.67
COMMD4-225ENST00000569245 HAGHQ16775 308 aa10.86□□□□□ -0.67
COMMD4-225ENST00000569245 ACOT6Q3I5F7 207 aaPredicted RBP10.86□□□□□ -0.67
COMMD4-225ENST00000569245 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
COMMD4-225ENST00000569245 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
COMMD4-225ENST00000569245 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms