RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 PI3P19957 117 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 AQP4P55087 323 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 UCP3P55916 312 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 SPCS3P61009 180 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 OR8G2PQ6IF36 304 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
CLK3-223ENST00000568488 A0A087WTM6 91 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 ZNF701M0R085 212 aaPredicted RBP11.09□□□□□ -0.63
CLK3-223ENST00000568488 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
CLK3-223ENST00000568488 PRSS3P35030 304 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 LYZP61626 148 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 SP6Q3SY56 376 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 C16orf74Q96GX8 76 aa11.09□□□□□ -0.63
CLK3-223ENST00000568488 DNAH8Q96JB1 4490 aa11.08□□□□□ -0.64
CLK3-223ENST00000568488 CEBPZOSA8MTT3 80 aa11.08□□□□□ -0.64
CLK3-223ENST00000568488 SIVA1O15304 175 aa11.08□□□□□ -0.64
CLK3-223ENST00000568488 HOXA5P20719 270 aa11.08□□□□□ -0.64
CLK3-223ENST00000568488 PIGPP57054 158 aa11.08□□□□□ -0.64
CLK3-223ENST00000568488 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
CLK3-223ENST00000568488 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 ZNF182P17025 639 aaPredicted RBP11.07□□□□□ -0.64
CLK3-223ENST00000568488 UCP1P25874 307 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 MEOX2P50222 304 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 TAS2R60P59551 318 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 ZNF90Q03938 601 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 KLF9Q13886 244 aaPredicted RBP11.07□□□□□ -0.64
CLK3-223ENST00000568488 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 RSG1Q9BU20 258 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.07□□□□□ -0.64
CLK3-223ENST00000568488 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
CLK3-223ENST00000568488 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 ADAP1O75689 374 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 GAGE7O76087 117 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 RND3P61587 244 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 RHOBP62745 196 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 NFE4Q86UQ8 179 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 PPP1R14DQ9NXH3 145 aa11.06□□□□□ -0.64
CLK3-223ENST00000568488 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 BOLA2-SMG1P6H3BVE0 249 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 RCVRNP35243 200 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 GALR1P47211 349 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 OR2F1Q13607 317 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 NOXA1Q86UR1 476 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 SLC25A22Q9H936 323 aa11.05□□□□□ -0.64
CLK3-223ENST00000568488 SNRPGP15A8MWD9 76 aa11.04□□□□□ -0.64
CLK3-223ENST00000568488 H3BNG1 76 aa11.04□□□□□ -0.64
CLK3-223ENST00000568488 GAMTQ14353 236 aa11.04□□□□□ -0.64
CLK3-223ENST00000568488 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
CLK3-223ENST00000568488 ZNF493Q6ZR52 646 aa11.04□□□□□ -0.64
CLK3-223ENST00000568488 ZNF486Q96H40 463 aaPredicted RBP11.04□□□□□ -0.64
CLK3-223ENST00000568488 LRP1Q07954 4544 aaKnown RBP11.03□□□□□ -0.64
CLK3-223ENST00000568488 FGL1Q08830 312 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
CLK3-223ENST00000568488 CNBD2Q96M20 576 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 SLC25A32Q9H2D1 315 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 COPZ2Q9P299 210 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 CACNG5Q9UF02 275 aa11.03□□□□□ -0.64
CLK3-223ENST00000568488 A0A096LPF7 62 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 NXPH4O95158 308 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 PLA2G1BP04054 148 aaKnown RBP11.02□□□□□ -0.65
CLK3-223ENST00000568488 FABP1P07148 127 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 SAMD12Q8N8I0 201 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 ZNF738Q8NE65 137 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
CLK3-223ENST00000568488 GPX8Q8TED1 209 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
CLK3-223ENST00000568488 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 IGLV5-52A0A0A0MRZ9 124 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 GABARAPH6UMI1 98 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 GABARAPO95166 117 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 RLN2P04090 185 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
CLK3-223ENST00000568488 AARDQ4LEZ3 155 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 NMSQ5H8A3 153 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 TMED4Q7Z7H5 227 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 ARRDC1Q8N5I2 433 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
CLK3-223ENST00000568488 FAT3Q8TDW7 4589 aa11□□□□□ -0.65
CLK3-223ENST00000568488 ZNF98A6NK75 572 aa11□□□□□ -0.65
CLK3-223ENST00000568488 CCDC28AQ8IWP9 274 aa11□□□□□ -0.65
CLK3-223ENST00000568488 LINC00612Q8N6U2 182 aa11□□□□□ -0.65
CLK3-223ENST00000568488 CCDC71LQ8N9Z2 235 aa11□□□□□ -0.65
CLK3-223ENST00000568488 NRG4Q8WWG1 115 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms