RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZNF414Q96IQ9 312 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 CITED4Q96RK1 184 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 MRPL27Q9P0M9 148 aaKnown RBP14.45□□□□□ -0.1
COMMD4-213ENST00000565834 GGCTO75223 188 aaKnown RBP14.44□□□□□ -0.1
COMMD4-213ENST00000565834 STAG3L2P0CL84 134 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 STAG3L3P0CL85 134 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 CDX1P47902 265 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-213ENST00000565834 TAS2R45P59539 299 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 IL34Q6ZMJ4 242 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 COMMD7Q86VX2 200 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 ZFAND3Q9H8U3 227 aa14.44□□□□□ -0.1
COMMD4-213ENST00000565834 TECRQ9NZ01 308 aaKnown RBP14.44□□□□□ -0.1
COMMD4-213ENST00000565834 CCL20P78556 96 aa14.43□□□□□ -0.1
COMMD4-213ENST00000565834 MORN5Q5VZ52 161 aa14.43□□□□□ -0.1
COMMD4-213ENST00000565834 S100A7AQ86SG5 101 aa14.43□□□□□ -0.1
COMMD4-213ENST00000565834 NUDT19A8MXV4 375 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 CXorf1O96002 111 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 ARL14EPLP0DKL9 152 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 C8orf88P0DMB2 117 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 PROK1P58294 105 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 KHDC3LQ587J8 217 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 IQCF2Q8IXL9 164 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 MARC2Q969Z3 335 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 SLC25A39Q9BZJ4 359 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-213ENST00000565834 RABAC1Q9UI14 185 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 IGHV3OR16-8A0A075B7F1 116 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 NDUFA4O00483 81 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 CD28P10747 220 aa14.42□□□□□ -0.1
COMMD4-213ENST00000565834 TRAV5A0A0B4J249 113 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 I3L521 148 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 PQLC2Q6ZP29 291 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 CCDC28AQ8IWP9 274 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 C11orf44Q8N8P7 122 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 C4orf3Q8WVX3 66 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 WFDC12Q8WWY7 111 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 SHANK2-AS3Q9BTD1 123 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 SLC25A2Q9BXI2 301 aa14.41□□□□□ -0.1
COMMD4-213ENST00000565834 A0A1B0GUS0 222 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 H3BRN7 92 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 OR7C2O60412 319 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 S100A7P31151 101 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 C18orf65Q6ZTR6 163 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 FAM167A-AS1Q96KT0 104 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 C20orf24Q9BUV8 137 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 SCRT1Q9BWW7 348 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 TMPRSS5Q9H3S3 457 aa14.4□□□□□ -0.1
COMMD4-213ENST00000565834 HSPB1P04792 205 aaKnown RBP14.39□□□□□ -0.11
COMMD4-213ENST00000565834 RPEL1Q2QD12 228 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 LEMD1Q68G75 181 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-213ENST00000565834 KLHL30-AS1Q8NEE0 82 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 IGHV4OR15-8A0A075B7B6 117 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 A0A087WW49 117 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 RAB19A4D1S5 217 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 GCHFRP30047 84 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 PSMB3P49720 205 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 FAM106AQ4KMX7 169 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 METTL26Q96S19 204 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 GNG13Q9P2W3 67 aa14.39□□□□□ -0.11
COMMD4-213ENST00000565834 UNQ9165/PRO28630Q6UXU0 137 aa14.38□□□□□ -0.11
COMMD4-213ENST00000565834 GPHB5Q86YW7 130 aa14.38□□□□□ -0.11
COMMD4-213ENST00000565834 STXBP6Q8NFX7 210 aa14.38□□□□□ -0.11
COMMD4-213ENST00000565834 TMEM190Q8WZ59 177 aa14.38□□□□□ -0.11
COMMD4-213ENST00000565834 ZNF503Q96F45 646 aa14.38□□□□□ -0.11
COMMD4-213ENST00000565834 CITED2Q99967 270 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-213ENST00000565834 TSSC4Q9Y5U2 329 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-213ENST00000565834 ZNF320A2RRD8 509 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 ZNF98A6NK75 572 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 ZNF207O43670 478 aaKnown RBP14.37□□□□□ -0.11
COMMD4-213ENST00000565834 IFNA1P01562 189 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 NPPCP23582 126 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 DEFB136Q30KP8 78 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 HIST2H2BDQ6DRA6 164 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 PAXXQ9BUH6 204 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 OR51M1Q9H341 326 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 RNF24Q9Y225 148 aa14.37□□□□□ -0.11
COMMD4-213ENST00000565834 OR10J4P0C629 311 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 PPT1P50897 306 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 UBE2L3P68036 154 aaKnown RBP14.36□□□□□ -0.11
COMMD4-213ENST00000565834 FOXL1Q12952 345 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 PMS2P11Q13670 270 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 GUK1Q16774 197 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 HAGHQ16775 308 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 TOR2AQ5JU69 321 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 EIF5A2Q9GZV4 153 aaKnown RBP14.36□□□□□ -0.11
COMMD4-213ENST00000565834 MANBALQ9NQG1 85 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 TMEM167BQ9NRX6 74 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 A0A1W2PRX2 142 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 RBFOX3A6NFN3 312 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 PYYP10082 97 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 ZP3P21754 424 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 CRYBB3P26998 211 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 HOXD3P31249 432 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-213ENST00000565834 LURAP1LQ8IV03 231 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
COMMD4-213ENST00000565834 DPF1Q92782 380 aa14.36□□□□□ -0.11
COMMD4-213ENST00000565834 LINC01619G3V211 115 aa14.35□□□□□ -0.11
COMMD4-213ENST00000565834 BCL2P10415 239 aa14.35□□□□□ -0.11
COMMD4-213ENST00000565834 GP9P14770 177 aa14.35□□□□□ -0.11
COMMD4-213ENST00000565834 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms