RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ZNF90Q03938 601 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 ERCC8Q13216 396 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 KDM4DQ6B0I6 523 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 PRIMA1Q86XR5 153 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 YIPF7Q8N8F6 280 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 FAM19A4Q96LR4 140 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP4-7Q9BYR0 210 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 IL36RNQ9UBH0 155 aa2.4□□□□□ -2.03
CHD9-216ENST00000565803 KLF18A0A0U1RQI7 1052 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 H3BQ15 152 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 PMS2P2O95744 297 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 TRACP01848 142 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 CELA2AP08217 269 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 OR5AC1P0C628 307 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 EGR2P11161 476 aaPredicted RBP2.39□□□□□ -2.03
CHD9-216ENST00000565803 WT1P19544 449 aaPredicted RBP2.39□□□□□ -2.03
CHD9-216ENST00000565803 HINT1P49773 126 aaPredicted RBP2.39□□□□□ -2.03
CHD9-216ENST00000565803 PCBD1P61457 104 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 PSG9Q00887 426 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 S100A7L2Q5SY68 101 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 SLC35E3Q7Z769 313 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 C6orf223Q8N319 242 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 RNF182Q8N6D2 247 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 OR10J6PQ8NGY7 276 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 AICDAQ9GZX7 198 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 IGHV1OR15-9A0A0B4J2B8 117 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 GRIFINA4D1Z8 144 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 LMX1BO60663 402 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 GNLYP22749 145 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 MORN3Q6PF18 240 aaPredicted RBP2.39□□□□□ -2.03
CHD9-216ENST00000565803 SHISA6Q6ZSJ9 500 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 STPG4Q8N801 248 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 OR10G8Q8NGN5 311 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 DDB2Q92466 427 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 LYZL4Q96KX0 146 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 PRELID3AQ96N28 172 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 TMEM204Q9BSN7 226 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 IFI27L2Q9H2X8 130 aa2.39□□□□□ -2.03
CHD9-216ENST00000565803 ASCC3Q8N3C0 2202 aaKnown RBP2.39□□□□□ -2.03
CHD9-216ENST00000565803 TRAV41A0A0B4J266 112 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TMEM256-PLSCR3K7ERE1 68 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 FFAR1O14842 300 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 GEMIN2O14893 280 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 CYB5AP00167 134 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 CRYGSP22914 178 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 INSL3P51460 131 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SLURP1P55000 103 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 NANOS2P60321 138 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 COA6Q5JTJ3 125 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 C1orf100Q5SVJ3 147 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 AADACL3Q5VUY0 350 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 UFSP1Q6NVU6 142 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 DAND5Q8N907 189 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 OR10G2Q8NGC3 310 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 OR4X2Q8NGF9 303 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ZNF519Q8TB69 540 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TMEM191AQ9H0A3 160 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 PDFQ9HBH1 243 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 CA10Q9NS85 328 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 MCTS1Q9ULC4 181 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 RNF11Q9Y3C5 154 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 PYGO1Q9Y3Y4 419 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 NUP210LQ5VU65 1888 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 PIKFYVEQ9Y2I7 2098 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ABCA2Q9BZC7 2435 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 IGHV4-61A0A0C4DH41 118 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 IGKV1-8A0A0C4DH67 115 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 MUC21A0A0G2JKD1 596 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 K7EQD1 137 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 IGHV4-59P01825 116 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 RBP4P02753 201 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 PRB4P10163 310 aaPredicted RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 SLC25A1P53007 311 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 HBBP68871 147 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 LAIR2Q6ISS4 152 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ZNF429Q86V71 674 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TMEM106AQ96A25 262 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SLC25A46Q96AG3 418 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 RAB37Q96AX2 223 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SNRNP25Q9BV90 132 aaKnown RBP2.38□□□□□ -2.03
CHD9-216ENST00000565803 NPCDR1Q9BY65 106 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SELENOIQ9C0D9 397 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 KLK15Q9H2R5 256 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 CELA1Q9UNI1 258 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 PLXNB1O43157 2135 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SDK1Q7Z5N4 2213 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TRBV19A0A075B6N1 114 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 TRAV9-2A0A087WT02 112 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 OR51F1A6NGY5 319 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 ZNF860A6NHJ4 632 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 RER1O15258 196 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 SYNGR2O43760 224 aa2.38□□□□□ -2.03
CHD9-216ENST00000565803 KRASP01116 189 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms