RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 Q8NAQ8 132 aa13.44□□□□□ -0.26
CLN6-204ENST00000564752 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
CLN6-204ENST00000564752 MITD1Q8WV92 249 aa13.44□□□□□ -0.26
CLN6-204ENST00000564752 HERC2O95714 4834 aa13.43□□□□□ -0.26
CLN6-204ENST00000564752 CFDP00746 253 aaPredicted RBP13.43□□□□□ -0.26
CLN6-204ENST00000564752 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
CLN6-204ENST00000564752 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
CLN6-204ENST00000564752 SEPSECSQ9HD40 501 aaKnown RBP13.43□□□□□ -0.26
CLN6-204ENST00000564752 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 TCRBP04435 133 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 TCTAP57738 103 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 C1orf194Q5T5A4 169 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 HRH4Q9H3N8 390 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
CLN6-204ENST00000564752 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 RBMY1A1P0DJD3 496 aaKnown RBP13.41□□□□□ -0.26
CLN6-204ENST00000564752 RBMY1CP0DJD4 496 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 C4BPBP20851 252 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
CLN6-204ENST00000564752 LINC00299Q6ZSB3 139 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 OR8I2Q8N0Y5 310 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 ZBTB8BQ8NAP8 495 aaPredicted RBP13.41□□□□□ -0.26
CLN6-204ENST00000564752 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
CLN6-204ENST00000564752 IGHV4-28A0A0C4DH34 117 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 ZNF705EA8MWA4 302 aaPredicted RBP13.4□□□□□ -0.26
CLN6-204ENST00000564752 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 PRR20EP86478 221 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 PRR20CP86479 221 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 PRR20DP86480 221 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 PRR20BP86481 221 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 PRR20AP86496 221 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 SLC45A2Q9UMX9 530 aa13.4□□□□□ -0.26
CLN6-204ENST00000564752 CCSO14618 274 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 METTL15P1P0C7V9 234 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 MIFP14174 115 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 GATA2P23769 480 aaPredicted RBP13.39□□□□□ -0.27
CLN6-204ENST00000564752 ID1P41134 155 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 S100ZQ8WXG8 99 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 TMEM147Q9BVK8 224 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 APLNQ9ULZ1 77 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 RCL1Q9Y2P8 373 aaKnown RBP13.39□□□□□ -0.27
CLN6-204ENST00000564752 X6R8D5 127 aa13.39□□□□□ -0.27
CLN6-204ENST00000564752 PMS2P5A8MQ11 134 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 IGLL5B9A064 214 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 TSC22D2O75157 780 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 CCNKO75909 580 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 ORM2P19652 201 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 S100A7P31151 101 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 PSMB3P49720 205 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 PAX9P55771 341 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 TAS2R30P59541 319 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 RRAS2P62070 204 aaPredicted RBP13.38□□□□□ -0.27
CLN6-204ENST00000564752 DLK1P80370 383 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 TMEM14EPQ6UXP3 125 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 CYP2G1PQ6ZSU1 146 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 ZNF431Q8TF32 576 aaPredicted RBP13.38□□□□□ -0.27
CLN6-204ENST00000564752 SEC22CQ9BRL7 303 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 WDR12Q9GZL7 423 aaKnown RBP13.38□□□□□ -0.27
CLN6-204ENST00000564752 SLC25A22Q9H936 323 aa13.38□□□□□ -0.27
CLN6-204ENST00000564752 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 IL5P05113 134 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 GALR1P47211 349 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
CLN6-204ENST00000564752 SAMD13Q5VXD3 122 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 TMEM182Q6ZP80 229 aaPredicted RBP13.37□□□□□ -0.27
CLN6-204ENST00000564752 OR10P1Q8NGE3 313 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 LINC00052Q96N35 136 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 SLC25A32Q9H2D1 315 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 MGAT4CQ9UBM8 478 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
CLN6-204ENST00000564752 ELOA3CA0A087WX78 387 aaPredicted RBP13.36□□□□□ -0.27
CLN6-204ENST00000564752 ZNF98A6NK75 572 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 H3BMM0 161 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 SOCS3O14543 225 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 MBPP02686 304 aaPredicted RBP13.36□□□□□ -0.27
CLN6-204ENST00000564752 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 MEOX2P50222 304 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 MZT2BQ6NZ67 158 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 DOK5Q9P104 306 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
CLN6-204ENST00000564752 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 FNDC10F2Z333 226 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 L7N2F9 121 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 ISLRO14498 428 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 RAP2BP61225 183 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 VAMP2P63027 116 aa13.35□□□□□ -0.27
CLN6-204ENST00000564752 C12orf45Q8N5I9 185 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms