RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SORL1Q92673 2214 aa9.44□□□□□ -0.9
KARS-204ENST00000564578 UBE2L5PA0A1B0GUS4 154 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 AGPAT2O15120 278 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 RAB4AP20338 218 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 WFDC1Q9HC57 220 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
KARS-204ENST00000564578 MLXQ9UH92 298 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 MEGF8Q7Z7M0 2845 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 IGHV3-49A0A0A0MS15 119 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 CRYBB3P26998 211 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 BTNL8Q6UX41 500 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 NEU1Q99519 415 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 SMIM3Q9BZL3 60 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 SMPXQ9UHP9 88 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 SLC45A2Q9UMX9 530 aa9.43□□□□□ -0.9
KARS-204ENST00000564578 IGHV3OR16-13A0A075B7E8 117 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 IGHV3-74A0A0B4J1X5 117 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 IGHV7-4-1A0A0J9YVY3 117 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 ODF1Q14990 250 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
KARS-204ENST00000564578 TCTE3Q8IZS6 198 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 ATP5SQ99766 215 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 GINS3Q9BRX5 216 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 U3KQE9 123 aa9.42□□□□□ -0.9
KARS-204ENST00000564578 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 CHEK1O14757 476 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 TSPAN4O14817 238 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 ARPC5O15511 151 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 LINC00869P0C866 280 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 NPPCP23582 126 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 CAMLGP49069 296 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 SELENOTP62341 195 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
KARS-204ENST00000564578 INO80EQ8NBZ0 244 aaPredicted RBP9.41□□□□□ -0.9
KARS-204ENST00000564578 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 RHPN1-AS1Q9BWJ2 59 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 GGTLC1Q9BX51 225 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 LYZP61626 148 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PRR20EP86478 221 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PRR20CP86479 221 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PRR20DP86480 221 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PRR20BP86481 221 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PRR20AP86496 221 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 ST8SIA2Q92186 375 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 METTL26Q96S19 204 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 RNF2Q99496 336 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 PBDC1Q9BVG4 233 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
KARS-204ENST00000564578 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
KARS-204ENST00000564578 IGHV3-66A0A0C4DH42 116 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
KARS-204ENST00000564578 FGF7P21781 194 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 PLP1P60201 277 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 TOR2AQ5JU69 321 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 CITED4Q96RK1 184 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
KARS-204ENST00000564578 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.9
KARS-204ENST00000564578 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 BUB3O43684 328 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 MPDU1O75352 247 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 DFFBO76075 338 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 ORM2P19652 201 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
KARS-204ENST00000564578 MIC13Q5XKP0 118 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
KARS-204ENST00000564578 RAB31Q13636 194 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 OPCMLQ14982 345 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
KARS-204ENST00000564578 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 CXCL2P19875 107 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 TAS2R60P59551 318 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 OR1B1Q8NGR6 318 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 TMEM37Q8WXS4 190 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 RSG1Q9BU20 258 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 PARD6GQ9BYG4 376 aaPredicted RBP9.38□□□□□ -0.91
KARS-204ENST00000564578 ARL6Q9H0F7 186 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 DOK5Q9P104 306 aa9.38□□□□□ -0.91
KARS-204ENST00000564578 C1QBP02746 253 aa9.37□□□□□ -0.91
KARS-204ENST00000564578 ZNF345Q14585 488 aa9.37□□□□□ -0.91
KARS-204ENST00000564578 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
KARS-204ENST00000564578 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms