RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 DRAM1Q8N682 238 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 TMEM255BQ8WV15 326 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 RPP25Q9BUL9 199 aaKnown RBP7.5□□□□□ -1.21
CDH1-205ENST00000562836 C16orf95Q9H693 158 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 PDFQ9HBH1 243 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 CACNG5Q9UF02 275 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 OARD1Q9Y530 152 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 PCNX3Q9H6A9 2034 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 MOB3BQ86TA1 216 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 RFESDQ8TAC1 157 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 TRAV41A0A0B4J266 112 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 CRYM-AS1A6NIL9 109 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 M0QZQ0 153 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 LTAP01374 205 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 IGKV1D-33P01593 117 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 IGKV1-33P01594 117 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 CISD3P0C7P0 127 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 CTLA4P16410 223 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 AMY2BP19961 511 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 HILS1P60008 231 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 NXT2Q9NPJ8 142 aaKnown RBP7.49□□□□□ -1.21
CDH1-205ENST00000562836 V9GYV3 84 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 CFPP27918 469 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 NSUN5P1Q3KNT7 163 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 CYYR1Q96J86 154 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 PILRAQ9UKJ1 303 aa7.49□□□□□ -1.21
CDH1-205ENST00000562836 IGF1P05019 195 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 LOXP28300 417 aaPredicted RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 SPACA5Q96QH8 159 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 PRDM14Q9GZV8 571 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 MYO16Q9Y6X6 1858 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 TIMM23O14925 209 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 ZNF883P0CG24 379 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 PYYP10082 97 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 IGFBP3P17936 291 aaPredicted RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 GCHFRP30047 84 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 SLC48A1Q6P1K1 146 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 FOXC2Q99958 501 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 TTTY13Q9BZ97 58 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 HEATR1Q9H583 2144 aaKnown RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 ARHGEF17Q96PE2 2063 aaPredicted RBP7.48□□□□□ -1.21
CDH1-205ENST00000562836 FANCMQ8IYD8 2048 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 H3BP45 60 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 SERF2P84101 59 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 EBI3Q14213 229 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 FRG2Q64ET8 278 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 FRG2BQ96QU4 278 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 NMNAT3Q96T66 252 aa7.48□□□□□ -1.21
CDH1-205ENST00000562836 BRCA2P51587 3418 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 NCBP2LA6PVI3 153 aaKnown RBP7.47□□□□□ -1.21
CDH1-205ENST00000562836 TMEM150CB9EJG8 249 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 PAX4O43316 350 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 IL4P05112 153 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 OR5AL1P0C617 328 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 SLC25A16P16260 332 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 PEBP1P30086 187 aaKnown RBP7.47□□□□□ -1.21
CDH1-205ENST00000562836 FXYD3Q14802 87 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 FAM201AQ5SY85 155 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 SLC22A24Q8N4F4 322 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 NFAM1Q8NET5 270 aaPredicted RBP7.47□□□□□ -1.21
CDH1-205ENST00000562836 GREB1Q4ZG55 1949 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 NDUFS7O75251 213 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 PDCD6O75340 191 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 FCER1GP30273 86 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 DLX1P56177 255 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 Q6ZS49 121 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 SBSPONQ8IVN8 264 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 Q8N1Y9 231 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 SMRP1Q8NCR6 262 aa7.47□□□□□ -1.21
CDH1-205ENST00000562836 IGLV3-27P01718 113 aa7.46□□□□□ -1.21
CDH1-205ENST00000562836 HES3Q5TGS1 186 aa7.46□□□□□ -1.21
CDH1-205ENST00000562836 SRSF12Q8WXF0 261 aaKnown RBP7.46□□□□□ -1.21
CDH1-205ENST00000562836 C18orf12Q96KH6 178 aa7.46□□□□□ -1.21
CDH1-205ENST00000562836 CCL24O00175 119 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 DAZ2Q13117 558 aaKnown RBP7.46□□□□□ -1.22
CDH1-205ENST00000562836 SS18Q15532 418 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 DAZ4Q86SG3 579 aaKnown RBP7.46□□□□□ -1.22
CDH1-205ENST00000562836 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
CDH1-205ENST00000562836 PLPPR2Q96GM1 343 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 ZNF442Q9H7R0 627 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.22
CDH1-205ENST00000562836 DAZ3Q9NR90 486 aaKnown RBP7.46□□□□□ -1.22
CDH1-205ENST00000562836 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
CDH1-205ENST00000562836 DNAH12Q6ZR08 3092 aa7.45□□□□□ -1.22
CDH1-205ENST00000562836 A0A0D9SEW6 157 aa7.45□□□□□ -1.22
CDH1-205ENST00000562836 ADM5C9JUS6 153 aa7.45□□□□□ -1.22
CDH1-205ENST00000562836 HMGN4O00479 90 aa7.45□□□□□ -1.22
CDH1-205ENST00000562836 ZNF138P52744 262 aa7.45□□□□□ -1.22
CDH1-205ENST00000562836 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
CDH1-205ENST00000562836 C22orf39Q6P5X5 142 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms