RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GPR82Q96P67 336 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 SLC25A39Q9BZJ4 359 aaPredicted RBP6.41□□□□□ -1.38
SMAD3-212ENST00000559937 RNASE7Q9H1E1 156 aaKnown RBP6.41□□□□□ -1.38
SMAD3-212ENST00000559937 C7orf69Q9H7B7 122 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 OTORQ9NRC9 128 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 KLK9Q9UKQ9 250 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 UNC79Q9P2D8 2635 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 CENPEQ02224 2701 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 ARHGAP32A7KAX9 2087 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 IGLV11-55A0A075B6I3 123 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 WI2-2373I1.2A0A1W2PRP0 233 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 SCGB2A1O75556 95 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 RD3LP0DJH9 198 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 PAX1P15863 534 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 CBLN1P23435 193 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 TPPP2P59282 170 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 LYZP61626 148 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 KLRD1Q13241 179 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 USF2Q15853 346 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-212ENST00000559937 IQCJQ1A5X6 159 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 ATP5L2Q7Z4Y8 100 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 LHFPL4Q7Z7J7 247 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 BPIFA4PQ86YQ2 179 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 TTC9CQ8N5M4 171 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 ARL6IP6Q8N6S5 226 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 OR4B1Q8NGF8 309 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 CMTM2Q8TAZ6 248 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 ITLN2Q8WWU7 325 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-212ENST00000559937 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 Q9H3A6 140 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF331Q9NQX6 463 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-212ENST00000559937 C1RLQ9NZP8 487 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 NAT8BQ9UHF3 227 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 HILPDAQ9Y5L2 63 aa6.4□□□□□ -1.38
SMAD3-212ENST00000559937 SOX21Q9Y651 276 aaPredicted RBP6.4□□□□□ -1.38
SMAD3-212ENST00000559937 HIVEP3Q5T1R4 2406 aa6.4□□□□□ -1.39
SMAD3-212ENST00000559937 HRNRQ86YZ3 2850 aaPredicted RBP6.39□□□□□ -1.39
SMAD3-212ENST00000559937 FAM231BA6NCW3 169 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 LTAP01374 205 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 TCRAP04437 139 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 S100A7P31151 101 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
SMAD3-212ENST00000559937 UBE2E1P51965 193 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 MFAP4P55083 255 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 RAB4BP61018 213 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 PRB3Q04118 309 aaPredicted RBP6.39□□□□□ -1.39
SMAD3-212ENST00000559937 HES1Q14469 280 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 C19orf35Q6ZS72 473 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 OR4F17Q8NGA8 305 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 ARPC1AQ92747 370 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 NOL4LQ96MY1 436 aaPredicted RBP6.39□□□□□ -1.39
SMAD3-212ENST00000559937 TXN2Q99757 166 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 GFRA4Q9GZZ7 299 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 LPAR2Q9HBW0 351 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 SERTAD4Q9NUC0 356 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 THYN1Q9P016 225 aa6.39□□□□□ -1.39
SMAD3-212ENST00000559937 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 TRAV34A0A0B4J273 112 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 SERTM2A0A1B0GWG4 89 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1W2PPR1 153 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 C19orf71A6NCJ1 209 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 A8MWL6 223 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 HLA-DRB1P01911 266 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 APELAP0DMC3 54 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 BRS3P32247 399 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 GNG5P63218 68 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 PDE6HQ13956 83 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 ASPHD1Q5U4P2 390 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 TMEM256Q8N2U0 113 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 ZNF491Q8N8L2 437 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 RNF125Q96EQ8 232 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 LINC00479Q96M42 142 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 FANCD2OSQ96PS1 177 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 PRSS22Q9GZN4 317 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 RPP21Q9H633 154 aaKnown RBP6.38□□□□□ -1.39
SMAD3-212ENST00000559937 UBTD1Q9HAC8 227 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 TP53TG3Q9ULZ0 132 aa6.38□□□□□ -1.39
SMAD3-212ENST00000559937 POLR3KQ9Y2Y1 108 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-212ENST00000559937 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 FBLL1A6NHQ2 334 aaKnown RBP6.37□□□□□ -1.39
SMAD3-212ENST00000559937 NPIPB6E9PJ23 425 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 K7EQM0 130 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 OVOL3O00110 214 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 GNG7O60262 68 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 OR2J3O76001 311 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 TOX4O94842 621 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 IGLC2P0DOY2 106 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 TMEM11P17152 192 aa6.37□□□□□ -1.39
SMAD3-212ENST00000559937 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms