RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 SULT1A4P0DMN0 295 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 SPP1P10451 314 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 NPY1RP25929 384 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 CCR6P51684 374 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 RPL11P62913 178 aaKnown RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 FLI1Q01543 452 aaPredicted RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF90Q03938 601 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 DHRS2Q13268 280 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 GAMTQ14353 236 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 SMCO1Q147U7 214 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 ACTL10Q5JWF8 245 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 MORN3Q6PF18 240 aaPredicted RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM182Q6ZP80 229 aaPredicted RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 STHQ8IWL8 128 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 LRTM2Q8N967 370 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 Q8WTZ3 238 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM231Q9H6L2 316 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 SEPSECSQ9HD40 501 aaKnown RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 ENY2Q9NPA8 101 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 CLEC5AQ9NY25 188 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 CELA1Q9UNI1 258 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 NACAE9PAV3 2078 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 RPS10-NUDT3A0A1W2PQS6 291 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 HELTA6NFD8 242 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 FABP12A6NFH5 140 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 CEBPZOSA8MTT3 80 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 H3BMM0 161 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 WRBO00258 174 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 RD3LP0DJH9 198 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 MIFP14174 115 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 AKR1C4P17516 323 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 HLA-DMBP28068 263 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 GPX4P36969 197 aaPredicted RBP3.98□□□□□ -1.77
SMAD3-209ENST00000558894 TCTAP57738 103 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM41BQ5BJD5 291 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 PSMG4Q5JS54 123 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 SIGLEC15Q6ZMC9 328 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF705AQ6ZN79 300 aaPredicted RBP3.98□□□□□ -1.77
SMAD3-209ENST00000558894 Q6ZTC4 211 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 CCDC190Q86UF4 302 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 LGI3Q8N145 548 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF709Q8N972 641 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 THAP8Q8NA92 274 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 OR51G1Q8NGK1 321 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 MCFD2Q8NI22 146 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 RNASE11Q8TAA1 199 aaKnown RBP3.98□□□□□ -1.77
SMAD3-209ENST00000558894 LRRC20Q8TCA0 184 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 C2CD4CQ8TF44 421 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 RNF125Q96EQ8 232 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 ACY3Q96HD9 319 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 MFFQ9GZY8 342 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 NRN1Q9NPD7 142 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 FBXL17Q9UF56 701 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 U3KQ87 197 aa3.98□□□□□ -1.77
SMAD3-209ENST00000558894 PMS2P5A8MQ11 134 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 PRSS47A8MTI9 375 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 A8MTW9 85 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF705FA8MVS1 300 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 C11orf94C9JXX5 98 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 F8W036 122 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 PTTG1O95997 202 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 IFNA10P01566 189 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF705DP0CH99 300 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF705BP0CI00 300 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 SLC25A6P12236 298 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 HLA-DRB4P13762 266 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 RAB4AP20338 218 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 TNP2Q05952 138 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM128Q5BJH2 165 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 OR8G2PQ6IF36 304 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 ETFRF1Q6IPR1 90 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 C20orf173Q96LM9 149 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 CLUHP3Q96NS8 147 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 SDHCQ99643 169 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 SAV1Q9H4B6 383 aaPredicted RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 CACFD1Q9UGQ2 172 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 SCP2D1Q9UJQ7 156 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 TBC1D24Q9ULP9 559 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 KCNIP3Q9Y2W7 256 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
SMAD3-209ENST00000558894 HLA-DRB4X5D2U9 266 aa3.97□□□□□ -1.77
SMAD3-209ENST00000558894 IGHV4-4A0A075B6R2 117 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 TRAV8-2A0A0B4J237 113 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 DUXBA0A1W2PPF3 345 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 LINC00862A6NCI5 91 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 CENPXA8MT69 81 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 IGLL5B9A064 214 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 F6UB75 175 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 L7N2F9 121 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 SFT2D2O95562 160 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 IFNA4P05014 189 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 S100A9P06702 114 aaKnown RBP3.96□□□□□ -1.78
SMAD3-209ENST00000558894 BTCP35070 178 aa3.96□□□□□ -1.78
SMAD3-209ENST00000558894 NKX2-1P43699 371 aaPredicted RBP3.96□□□□□ -1.78
SMAD3-209ENST00000558894 PAX9P55771 341 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms