RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PTBP1P26599 531 aaKnown RBP eCLIP2.38□□□□□ -2.03
CHD8-212ENST00000557329 MRPS15P82914 257 aaKnown RBP2.38□□□□□ -2.03
CHD8-212ENST00000557329 GK3PQ14409 553 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 HMGN3Q15651 99 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 RRN3P1Q2M238 152 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 LHFPL3Q86UP9 236 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 ZNF502Q8TBZ5 544 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 GNPNAT1Q96EK6 184 aaPredicted RBP2.38□□□□□ -2.03
CHD8-212ENST00000557329 NRBF2Q96F24 287 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 MRPL48Q96GC5 212 aaKnown RBP2.38□□□□□ -2.03
CHD8-212ENST00000557329 NARS2Q96I59 477 aaKnown RBP2.38□□□□□ -2.03
CHD8-212ENST00000557329 LINC00052Q96N35 136 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 GINS4Q9BRT9 223 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 SIKE1Q9BRV8 207 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 GINS3Q9BRX5 216 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 TMBIM4Q9HC24 238 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 TMEM138Q9NPI0 162 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 SDHAF2Q9NX18 166 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 C21orf62Q9NYP8 219 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 CKLFQ9UBR5 152 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 WARS2Q9UGM6 360 aaKnown RBP2.38□□□□□ -2.03
CHD8-212ENST00000557329 ARL2BPQ9Y2Y0 163 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 GOLT1BQ9Y3E0 138 aa2.38□□□□□ -2.03
CHD8-212ENST00000557329 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 A0A0U1RRA0 63 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 HELTA6NFD8 242 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 SMIM9A6NGZ8 99 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 TMEM212A6NML5 194 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR4C45A6NMZ5 311 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 ZNF705GA8MUZ8 300 aaPredicted RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 RS1O15537 224 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 GNG7O60262 68 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 PRM2P04554 102 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 ATP5G1P05496 136 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 CD5P06127 495 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR13C7P0DN81 318 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 GNRHRP30968 328 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 ATP5G3P48201 142 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 GBX2P52951 348 aaPredicted RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 SNRPD3P62318 126 aaKnown RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 RCN1Q15293 331 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 ESRGQ1W209 222 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 LY6G6FQ5SQ64 297 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR10K2Q6IF99 312 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 DHFR2Q86XF0 187 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 CMTM1Q8IZ96 169 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 CBR4Q8N4T8 237 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR10W1Q8NGF6 305 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR4C16Q8NGL9 310 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 OR10J5Q8NHC4 309 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 VSTM2AQ8TAG5 236 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 TMEM230Q96A57 120 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 SLC25A46Q96AG3 418 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 CMTM5Q96DZ9 223 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 ATP6V0BQ99437 205 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 AGMATQ9BSE5 352 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 HDHD3Q9BSH5 251 aaPredicted RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 COMMD5Q9GZQ3 224 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 PPDPFQ9H3Y8 114 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 RIBC2Q9H4K1 309 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 TMEM231Q9H6L2 316 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 MRPS7Q9Y2R9 242 aaKnown RBP2.37□□□□□ -2.03
CHD8-212ENST00000557329 PRELID3BQ9Y3B1 194 aa2.37□□□□□ -2.03
CHD8-212ENST00000557329 IGLV11-55A0A075B6I3 123 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 A0A075B6Q4 140 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 TRAV26-1A0A087WT03 109 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 PNMA8CA0A1B0GUJ8 204 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 SIVA1O15304 175 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 CRYGCP07315 174 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 ZNF735P0CB33 412 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 HLA-GP17693 338 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 NPPCP23582 126 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 FGF9P31371 208 aaPredicted RBP2.36□□□□□ -2.03
CHD8-212ENST00000557329 EIF2B2P49770 351 aaKnown RBP2.36□□□□□ -2.03
CHD8-212ENST00000557329 GTF2A1P52655 376 aaPredicted RBP2.36□□□□□ -2.03
CHD8-212ENST00000557329 RPL8P62917 257 aaKnown RBP2.36□□□□□ -2.03
CHD8-212ENST00000557329 HLA-DRB3P79483 266 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 GAMTQ14353 236 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 HSP90B2PQ58FF3 399 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 AADACL4Q5VUY2 407 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 TLCD1Q96CP7 247 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 TMEM101Q96IK0 257 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 ADTRPQ96IZ2 230 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 CMSS1Q9BQ75 279 aaKnown RBP2.36□□□□□ -2.03
CHD8-212ENST00000557329 TMEM70Q9BUB7 260 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 AK3Q9UIJ7 227 aa2.36□□□□□ -2.03
CHD8-212ENST00000557329 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
CHD8-212ENST00000557329 IGHV1OR15-1A0A075B7D0 117 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 A0A096LPF7 62 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TRAV3A0A0B4J244 114 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 A0A0U1RQV1 116 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 TRDCB7Z8K6 153 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 PANO1I0J062 215 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 SC5DO75845 299 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 SNAPINO95295 136 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 HRASP01112 189 aa2.35□□□□□ -2.03
CHD8-212ENST00000557329 CTSGP08311 255 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms