RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 TMEM213A2RRL7 107 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 C2orf70A6NJV1 201 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 MBP02144 154 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 CSN3P07498 182 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 TPT1P13693 172 aaKnown RBP9.49□□□□□ -0.89
SHMT2-221ENST00000555773 CD33P20138 364 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 CBLN1P23435 193 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 IL34Q6ZMJ4 242 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 OR1B1Q8NGR6 318 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 STOML3Q8TAV4 291 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 PFDN5Q99471 154 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 U3KQE9 123 aa9.49□□□□□ -0.89
SHMT2-221ENST00000555773 IGHV3OR16-8A0A075B7F1 116 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 IGHV7-4-1A0A0J9YVY3 117 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 CD5P06127 495 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 OR5G3P0C626 314 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 SEC11BP0C7V7 166 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 SPP1P10451 314 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 FOLR2P14207 255 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 INSL3P51460 131 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 ACOT6Q3I5F7 207 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-221ENST00000555773 FFAR4Q5NUL3 377 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 PRR31Q5SQ13 230 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
SHMT2-221ENST00000555773 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 RNF2Q99496 336 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 TMEM231Q9H6L2 316 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 TECRQ9NZ01 308 aaKnown RBP9.48□□□□□ -0.89
SHMT2-221ENST00000555773 HIGD1AQ9Y241 93 aa9.48□□□□□ -0.89
SHMT2-221ENST00000555773 BOLA2-SMG1P6H3BVE0 249 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 ZNF207O43670 478 aaKnown RBP9.47□□□□□ -0.89
SHMT2-221ENST00000555773 BUB3O43684 328 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 M6PRP20645 277 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 C10orf113Q5VZT2 155 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 VSIRQ9H7M9 311 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 DOK5Q9P104 306 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 ANK2Q01484 3957 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
SHMT2-221ENST00000555773 SEC14L6B5MCN3 397 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 CHEK1O14757 476 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 LINC00305Q7Z4B0 112 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-221ENST00000555773 SH3BGRL3Q9H299 93 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
SHMT2-221ENST00000555773 ZNF98A6NK75 572 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 SAP30O75446 220 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 OR10G9Q8NGN4 311 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 OR10G7Q8NGN6 311 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 GPR82Q96P67 336 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 BOLA1Q9Y3E2 137 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 RFNGQ9Y644 331 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
SHMT2-221ENST00000555773 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 HELTA6NFD8 242 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 H3BRN7 92 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 APOHP02749 345 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-221ENST00000555773 RHOBP62745 196 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 TMEM41BQ5BJD5 291 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 GCSAMLQ5JQS6 135 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 OR8I2Q8N0Y5 310 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 PHYHIPLQ96FC7 376 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 UHRF2Q96PU4 802 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
SHMT2-221ENST00000555773 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 VWFP04275 2813 aa9.44□□□□□ -0.9
SHMT2-221ENST00000555773 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 IGHV3-49A0A0A0MS15 119 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 WIPF1O43516 503 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 IGLV1-51P01701 117 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 RPL7P18124 248 aaKnown RBP9.43□□□□□ -0.9
SHMT2-221ENST00000555773 RAB5CP51148 216 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 ACTR3CQ9C0K3 210 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-221ENST00000555773 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
SHMT2-221ENST00000555773 RPRMQ9NS64 109 aa9.43□□□□□ -0.9
SHMT2-221ENST00000555773 MLXQ9UH92 298 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms