RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 I3L521 148 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 NDUFA4O00483 81 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
NEK9-202ENST00000553823 EIF3GO75821 320 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEK9-202ENST00000553823 HSPB1P04792 205 aaKnown RBP9.04□□□□□ -0.96
NEK9-202ENST00000553823 FOXL1Q12952 345 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
NEK9-202ENST00000553823 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 LINC00305Q7Z4B0 112 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 S100A7AQ86SG5 101 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 UHRF2Q96PU4 802 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 ZFAND3Q9H8U3 227 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 IGHV4OR15-8A0A075B7B6 117 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 A0A087WW49 117 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 A0A1B0GV50 99 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 NUDT19A8MXV4 375 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 C8orf88P0DMB2 117 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 S100A7P31151 101 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 FGF8P55075 233 aaPredicted RBP9.03□□□□□ -0.96
NEK9-202ENST00000553823 TAS2R45P59539 299 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 RPEL1Q2QD12 228 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 FAM106AQ4KMX7 169 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 C18orf65Q6ZTR6 163 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 KLHL30-AS1Q8NEE0 82 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
NEK9-202ENST00000553823 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
NEK9-202ENST00000553823 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
NEK9-202ENST00000553823 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
NEK9-202ENST00000553823 TSSC4Q9Y5U2 329 aaPredicted RBP9.03□□□□□ -0.96
NEK9-202ENST00000553823 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 H3BRN7 92 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 CXorf1O96002 111 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 STAG3L2P0CL84 134 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 STAG3L3P0CL85 134 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 ARL14EPLP0DKL9 152 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 KHDC3LQ587J8 217 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 MORN5Q5VZ52 161 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 HIST2H2BDQ6DRA6 164 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 GPHB5Q86YW7 130 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 METTL26Q96S19 204 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 C20orf24Q9BUV8 137 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 PFDN2Q9UHV9 154 aa9.02□□□□□ -0.97
NEK9-202ENST00000553823 TRAV5A0A0B4J249 113 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 ZNF320A2RRD8 509 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 LINC00862A6NCI5 91 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 LINC01619G3V211 115 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 ZP3P21754 424 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 NDUFA5Q16718 116 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 DEFB136Q30KP8 78 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 UNQ9165/PRO28630Q6UXU0 137 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 PQLC2Q6ZP29 291 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 OR1N2Q8NGR9 330 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 DPF1Q92782 380 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 FAM167A-AS1Q96KT0 104 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 SCRT1Q9BWW7 348 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 SLC25A2Q9BXI2 301 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 MED9Q9NWA0 146 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
NEK9-202ENST00000553823 A0A1W2PRX2 142 aa9□□□□□ -0.97
NEK9-202ENST00000553823 ZNF98A6NK75 572 aa9□□□□□ -0.97
NEK9-202ENST00000553823 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
NEK9-202ENST00000553823 OR7C2O60412 319 aa9□□□□□ -0.97
NEK9-202ENST00000553823 NPPCP23582 126 aa9□□□□□ -0.97
NEK9-202ENST00000553823 CRYBB3P26998 211 aa9□□□□□ -0.97
NEK9-202ENST00000553823 GCHFRP30047 84 aa9□□□□□ -0.97
NEK9-202ENST00000553823 HOXD3P31249 432 aaPredicted RBP9□□□□□ -0.97
NEK9-202ENST00000553823 KRTAP10-3P60369 221 aa9□□□□□ -0.97
NEK9-202ENST00000553823 CCL20P78556 96 aa9□□□□□ -0.97
NEK9-202ENST00000553823 AWAT1Q58HT5 328 aa9□□□□□ -0.97
NEK9-202ENST00000553823 LEMD1Q68G75 181 aa9□□□□□ -0.97
NEK9-202ENST00000553823 IL34Q6ZMJ4 242 aa9□□□□□ -0.97
NEK9-202ENST00000553823 PRIMA1Q86XR5 153 aa9□□□□□ -0.97
NEK9-202ENST00000553823 IQCF2Q8IXL9 164 aa9□□□□□ -0.97
NEK9-202ENST00000553823 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
NEK9-202ENST00000553823 OR11H1Q8NG94 326 aa9□□□□□ -0.97
NEK9-202ENST00000553823 MARC2Q969Z3 335 aa9□□□□□ -0.97
NEK9-202ENST00000553823 K7EMT4 169 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 LGALS9O00182 355 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 PSMB3P49720 205 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 PPT1P50897 306 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 KRTAP24-1Q3LI83 254 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 REC114Q7Z4M0 266 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 COMMD7Q86VX2 200 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 NDUFA11Q86Y39 141 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 C1QL4Q86Z23 238 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 ZNF503Q96F45 646 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 NARS2Q96I59 477 aaKnown RBP8.99□□□□□ -0.97
NEK9-202ENST00000553823 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 OR51M1Q9H341 326 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 TMPRSS5Q9H3S3 457 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
NEK9-202ENST00000553823 UFC1Q9Y3C8 167 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 U3KQE9 123 aa8.99□□□□□ -0.97
NEK9-202ENST00000553823 ADARB2-AS1A8MUL3 147 aa8.98□□□□□ -0.97
NEK9-202ENST00000553823 CCL24O00175 119 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms