RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 PGAM2P15259 253 aa8.83□□□□□ -1
VPS29-211ENST00000553128 HTN1P15515 57 aa8.83□□□□□ -1
VPS29-211ENST00000553128 M6PRP20645 277 aa8.83□□□□□ -1
VPS29-211ENST00000553128 RND3P61587 244 aa8.83□□□□□ -1
VPS29-211ENST00000553128 SUPT4H1P63272 117 aaKnown RBP8.83□□□□□ -1
VPS29-211ENST00000553128 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
VPS29-211ENST00000553128 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
VPS29-211ENST00000553128 C16orf92Q96LL3 132 aa8.83□□□□□ -1
VPS29-211ENST00000553128 RNF213Q63HN8 5207 aa8.83□□□□□ -1
VPS29-211ENST00000553128 C3orf85A0A1B0GTC6 90 aa8.82□□□□□ -1
VPS29-211ENST00000553128 PRSS3P35030 304 aa8.82□□□□□ -1
VPS29-211ENST00000553128 PIGPP57054 158 aa8.82□□□□□ -1
VPS29-211ENST00000553128 LYZP61626 148 aa8.82□□□□□ -1
VPS29-211ENST00000553128 TRIM16LQ309B1 348 aa8.82□□□□□ -1
VPS29-211ENST00000553128 AARDQ4LEZ3 155 aa8.82□□□□□ -1
VPS29-211ENST00000553128 ARRDC1Q8N5I2 433 aa8.82□□□□□ -1
VPS29-211ENST00000553128 S100A16Q96FQ6 103 aaKnown RBP8.82□□□□□ -1
VPS29-211ENST00000553128 LINC01587Q99440 93 aa8.82□□□□□ -1
VPS29-211ENST00000553128 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
VPS29-211ENST00000553128 TIMM8BQ9Y5J9 83 aaPredicted RBP8.82□□□□□ -1
VPS29-211ENST00000553128 LOC100506127A0A0U1RQW1 187 aa8.81□□□□□ -1
VPS29-211ENST00000553128 GCSHP23434 173 aa8.81□□□□□ -1
VPS29-211ENST00000553128 TGFBR1P36897 503 aa8.81□□□□□ -1
VPS29-211ENST00000553128 NUP62P37198 522 aaPredicted RBP8.81□□□□□ -1
VPS29-211ENST00000553128 RNASE12Q5GAN4 147 aaKnown RBP8.81□□□□□ -1
VPS29-211ENST00000553128 C1orf194Q5T5A4 169 aa8.81□□□□□ -1
VPS29-211ENST00000553128 SPARTQ8N0X7 666 aa8.81□□□□□ -1
VPS29-211ENST00000553128 OR8I2Q8N0Y5 310 aa8.81□□□□□ -1
VPS29-211ENST00000553128 RNF182Q8N6D2 247 aa8.81□□□□□ -1
VPS29-211ENST00000553128 OR52E5Q8NH55 327 aa8.81□□□□□ -1
VPS29-211ENST00000553128 GPX8Q8TED1 209 aa8.81□□□□□ -1
VPS29-211ENST00000553128 RRNAD1Q96FB5 475 aaKnown RBP8.81□□□□□ -1
VPS29-211ENST00000553128 CNBD2Q96M20 576 aa8.81□□□□□ -1
VPS29-211ENST00000553128 B2MP61769 119 aa8.8□□□□□ -1
VPS29-211ENST00000553128 OR2F1Q13607 317 aa8.8□□□□□ -1
VPS29-211ENST00000553128 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
VPS29-211ENST00000553128 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
VPS29-211ENST00000553128 ETFRF1Q6IPR1 90 aa8.8□□□□□ -1
VPS29-211ENST00000553128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
VPS29-211ENST00000553128 GPR141Q7Z602 305 aa8.8□□□□□ -1
VPS29-211ENST00000553128 LINC00612Q8N6U2 182 aa8.8□□□□□ -1
VPS29-211ENST00000553128 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
VPS29-211ENST00000553128 LHFPL5Q8TAF8 219 aa8.8□□□□□ -1
VPS29-211ENST00000553128 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
VPS29-211ENST00000553128 C16orf74Q96GX8 76 aa8.8□□□□□ -1
VPS29-211ENST00000553128 RSG1Q9BU20 258 aa8.8□□□□□ -1
VPS29-211ENST00000553128 SLC25A32Q9H2D1 315 aa8.8□□□□□ -1
VPS29-211ENST00000553128 A0A096LPF7 62 aa8.79□□□□□ -1
VPS29-211ENST00000553128 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
VPS29-211ENST00000553128 CEBPZOSA8MTT3 80 aa8.79□□□□□ -1
VPS29-211ENST00000553128 ATG12O94817 140 aa8.79□□□□□ -1
VPS29-211ENST00000553128 UCP1P25874 307 aa8.79□□□□□ -1
VPS29-211ENST00000553128 RCVRNP35243 200 aa8.79□□□□□ -1
VPS29-211ENST00000553128 TAS2R60P59551 318 aa8.79□□□□□ -1
VPS29-211ENST00000553128 KLF9Q13886 244 aaPredicted RBP8.79□□□□□ -1
VPS29-211ENST00000553128 MEF2DQ14814 521 aa8.79□□□□□ -1
VPS29-211ENST00000553128 NMSQ5H8A3 153 aa8.79□□□□□ -1
VPS29-211ENST00000553128 SAMD12Q8N8I0 201 aa8.79□□□□□ -1
VPS29-211ENST00000553128 PPP1R14BQ96C90 147 aa8.79□□□□□ -1
VPS29-211ENST00000553128 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.79□□□□□ -1
VPS29-211ENST00000553128 CACNG5Q9UF02 275 aa8.79□□□□□ -1
VPS29-211ENST00000553128 BLOC1S6Q9UL45 172 aa8.79□□□□□ -1
VPS29-211ENST00000553128 GAGE12BA1L429 117 aa8.78□□□□□ -1
VPS29-211ENST00000553128 ZFP92A6NM28 416 aa8.78□□□□□ -1
VPS29-211ENST00000553128 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
VPS29-211ENST00000553128 SIVA1O15304 175 aa8.78□□□□□ -1
VPS29-211ENST00000553128 GAGE7O76087 117 aa8.78□□□□□ -1
VPS29-211ENST00000553128 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
VPS29-211ENST00000553128 GAGE12FP0CL80 117 aa8.78□□□□□ -1
VPS29-211ENST00000553128 GAGE12GP0CL81 117 aa8.78□□□□□ -1
VPS29-211ENST00000553128 GAGE12IP0CL82 117 aa8.78□□□□□ -1
VPS29-211ENST00000553128 GAMTQ14353 236 aa8.78□□□□□ -1
VPS29-211ENST00000553128 TMEM144Q7Z5S9 345 aa8.78□□□□□ -1
VPS29-211ENST00000553128 LHFPL1Q86WI0 220 aa8.78□□□□□ -1
VPS29-211ENST00000553128 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
VPS29-211ENST00000553128 ZNF486Q96H40 463 aaPredicted RBP8.78□□□□□ -1
VPS29-211ENST00000553128 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
VPS29-211ENST00000553128 SLC25A22Q9H936 323 aa8.78□□□□□ -1
VPS29-211ENST00000553128 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
VPS29-211ENST00000553128 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
VPS29-211ENST00000553128 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
VPS29-211ENST00000553128 MEOX2P50222 304 aa8.77□□□□□ -1.01
VPS29-211ENST00000553128 KIR3DS1Q14943 382 aa8.77□□□□□ -1.01
VPS29-211ENST00000553128 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
VPS29-211ENST00000553128 TMPRSS5Q9H3S3 457 aa8.77□□□□□ -1.01
VPS29-211ENST00000553128 H3BNG1 76 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 NXPH4O95158 308 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 GALR1P47211 349 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 GABARAPL2P60520 117 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 SAMD13Q5VXD3 122 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 SNX29P2Q8IUI4 249 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 TMEM256Q8N2U0 113 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 TMEM263Q8WUH6 116 aaKnown RBP8.76□□□□□ -1.01
VPS29-211ENST00000553128 COPZ2Q9P299 210 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
VPS29-211ENST00000553128 IGKV1OR2-108A0A075B7D4 117 aa8.75□□□□□ -1.01
VPS29-211ENST00000553128 ZNF98A6NK75 572 aa8.75□□□□□ -1.01
VPS29-211ENST00000553128 SNRPGP15A8MWD9 76 aa8.75□□□□□ -1.01
VPS29-211ENST00000553128 CDS2O95674 445 aa8.75□□□□□ -1.01
VPS29-211ENST00000553128 OR5AC1P0C628 307 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms