RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 KCNIP2Q9NS61 270 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 RNF24Q9Y225 148 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 SORL1Q92673 2214 aa16.19■□□□□ 0.18
NEK3-202ENST00000550841 IGHV3OR16-13A0A075B7E8 117 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 IGHV3-74A0A0B4J1X5 117 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 HMSDA8MTL9 139 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 APOHP02749 345 aaPredicted RBP16.18■□□□□ 0.18
NEK3-202ENST00000550841 KRTAP10-11P60412 298 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 OPCMLQ14982 345 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 AKAP14Q86UN6 197 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 RNF2Q99496 336 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 NPCDR1Q9BY65 106 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 MFFQ9GZY8 342 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 FBXL17Q9UF56 701 aa16.18■□□□□ 0.18
NEK3-202ENST00000550841 ELOA3CA0A087WX78 387 aaPredicted RBP16.17■□□□□ 0.18
NEK3-202ENST00000550841 ARPC5O15511 151 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 GP9P14770 177 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 PAFAH1B2P68402 229 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 C1orf194Q5T5A4 169 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 TMEM61Q8N0U2 210 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 ARL6Q9H0F7 186 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 HIGD1AQ9Y241 93 aa16.17■□□□□ 0.18
NEK3-202ENST00000550841 IGHV3-66A0A0C4DH42 116 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 RNF222A6NCQ9 220 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 HELTA6NFD8 242 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 TAAR5O14804 337 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 TSPAN4O14817 238 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 BUB3O43684 328 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 OR5G3P0C626 314 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 B2MP61769 119 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 PRR20EP86478 221 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 PRR20CP86479 221 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 PRR20DP86480 221 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 PRR20BP86481 221 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 PRR20AP86496 221 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 GUCA2BQ16661 112 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 MIC13Q5XKP0 118 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 C16orf54Q6UWD8 224 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 TCF24Q7RTU0 167 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 STPG3Q8N7X2 389 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 OR1L4Q8NGR5 311 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 SPAG8Q99932 426 aaPredicted RBP16.16■□□□□ 0.18
NEK3-202ENST00000550841 WFDC1Q9HC57 220 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 SLC39A9Q9NUM3 307 aa16.16■□□□□ 0.18
NEK3-202ENST00000550841 IZUMO1RA6ND01 250 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 ZNF785A8K8V0 405 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 RPL11P62913 178 aaKnown RBP16.15■□□□□ 0.18
NEK3-202ENST00000550841 FAM90A2PQ658T7 463 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 DNAJC4Q9NNZ3 241 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 DOK5Q9P104 306 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 PXMP4Q9Y6I8 212 aa16.15■□□□□ 0.18
NEK3-202ENST00000550841 BORCS7-ASMTA0A0B4J1R7 106 aa16.14■□□□□ 0.17
NEK3-202ENST00000550841 A0A1B0GVG6 124 aa16.14■□□□□ 0.17
NEK3-202ENST00000550841 COX7A2P2O60397 106 aa16.14■□□□□ 0.17
NEK3-202ENST00000550841 PFDN5Q99471 154 aa16.14■□□□□ 0.17
NEK3-202ENST00000550841 ARV1Q9H2C2 271 aa16.14■□□□□ 0.17
NEK3-202ENST00000550841 A0A0D9SG52 128 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 ZNF345Q14585 488 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 GTSCR1Q86UQ5 136 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 OR8I2Q8N0Y5 310 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 OR11H4Q8NGC9 324 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 GLMPQ8WWB7 406 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 SLC25A39Q9BZJ4 359 aaPredicted RBP16.13■□□□□ 0.17
NEK3-202ENST00000550841 SELENOKQ9Y6D0 94 aa16.13■□□□□ 0.17
NEK3-202ENST00000550841 OR4C46A6NHA9 309 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 ZNF98A6NK75 572 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 C10orf113Q5VZT2 155 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 GATAD1Q8WUU5 269 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 GPR82Q96P67 336 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 SHANK2-AS3Q9BTD1 123 aa16.12■□□□□ 0.17
NEK3-202ENST00000550841 TRAV2A0A0B4J234 112 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 DNASE2O00115 360 aaPredicted RBP16.11■□□□□ 0.17
NEK3-202ENST00000550841 C1QBP02746 253 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 CMC4P56277 68 aaPredicted RBP16.11■□□□□ 0.17
NEK3-202ENST00000550841 PATE2Q6UY27 113 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 SIGLEC15Q6ZMC9 328 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 KCNRGQ8N5I3 272 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 PRR25Q96S07 402 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 AURKAIP1Q9NWT8 199 aaPredicted RBP16.11■□□□□ 0.17
NEK3-202ENST00000550841 TIMM9Q9Y5J7 89 aa16.11■□□□□ 0.17
NEK3-202ENST00000550841 H3BRN7 92 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 JTBO76095 146 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 LINC00305Q7Z4B0 112 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 TMEM37Q8WXS4 190 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 HYLS1Q96M11 299 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 RSG1Q9BU20 258 aa16.1■□□□□ 0.17
NEK3-202ENST00000550841 IGKV3-7A0A075B6H7 116 aa16.09■□□□□ 0.17
NEK3-202ENST00000550841 GALR1P47211 349 aa16.09■□□□□ 0.17
NEK3-202ENST00000550841 ARPC5LQ9BPX5 153 aa16.09■□□□□ 0.17
NEK3-202ENST00000550841 MS4A6AQ9H2W1 248 aa16.09■□□□□ 0.17
NEK3-202ENST00000550841 SLC25A22Q9H936 323 aa16.09■□□□□ 0.17
NEK3-202ENST00000550841 TGP01266 2768 aa16.08■□□□□ 0.16
NEK3-202ENST00000550841 RPL7P18124 248 aaKnown RBP16.08■□□□□ 0.16
NEK3-202ENST00000550841 GBGT1Q8N5D6 347 aa16.08■□□□□ 0.16
NEK3-202ENST00000550841 STXBP6Q8NFX7 210 aa16.08■□□□□ 0.16
NEK3-202ENST00000550841 GNPNAT1Q96EK6 184 aaPredicted RBP16.08■□□□□ 0.16
NEK3-202ENST00000550841 UHRF2Q96PU4 802 aa16.08■□□□□ 0.16
NEK3-202ENST00000550841 NOTCH1P46531 2555 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 KANTRA0A1W2PQU2 76 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 PRB2P02812 416 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms