RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 HBG2P69892 147 aa19.26■□□□□ 0.67
CPSF6-205ENST00000550075 TMEM147Q9BVK8 224 aa19.26■□□□□ 0.67
CPSF6-205ENST00000550075 FAM24AA6NFZ4 105 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 SULT1A1P50225 295 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 ARL16Q0P5N6 197 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 S100A7AQ86SG5 101 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 APRG1Q8IVJ8 170 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 NRN1Q9NPD7 142 aa19.25■□□□□ 0.67
CPSF6-205ENST00000550075 CST7O76096 145 aa19.24■□□□□ 0.67
CPSF6-205ENST00000550075 ORM2P19652 201 aa19.24■□□□□ 0.67
CPSF6-205ENST00000550075 GATA2P23769 480 aaPredicted RBP19.24■□□□□ 0.67
CPSF6-205ENST00000550075 DEFB131AP59861 70 aa19.24■□□□□ 0.67
CPSF6-205ENST00000550075 ZNF546Q86UE3 836 aa19.24■□□□□ 0.67
CPSF6-205ENST00000550075 DCANP1Q8TF63 244 aa19.24■□□□□ 0.67
CPSF6-205ENST00000550075 KIR2DL5BA0A0G2JN68 375 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 KIR2DL5BA0A0G2JPC4 375 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 E5RGE8 158 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 LINC00869P0C866 280 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 RAP2BP61225 183 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 LRRC37A5PQ49AS3 106 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 OR8I2Q8N0Y5 310 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 KIR2DL5AQ8N109 375 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 TMEM252Q8N6L7 170 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 TMEM217Q8N7C4 229 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 OR1B1Q8NGR6 318 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 KIR2DL5BQ8NHK3 375 aa19.23■□□□□ 0.67
CPSF6-205ENST00000550075 TENM3Q9P273 2699 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 HUWE1Q7Z6Z7 4374 aaKnown RBP19.22■□□□□ 0.67
CPSF6-205ENST00000550075 UBE2CO00762 179 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 ZNF688P0C7X2 276 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 PET100P0DJ07 73 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 S100A11P31949 105 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 RAB31Q13636 194 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 FAM24BQ8N5W8 94 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 UQCC1Q9NVA1 299 aa19.22■□□□□ 0.67
CPSF6-205ENST00000550075 IGSF23A1L1A6 192 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 RPL35AP18077 110 aaKnown RBP19.21■□□□□ 0.67
CPSF6-205ENST00000550075 H2BFSP57053 126 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 SNRPD3P62318 126 aaKnown RBP19.21■□□□□ 0.67
CPSF6-205ENST00000550075 STPG3Q8N7X2 389 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 SLC25A31Q9H0C2 315 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 SEPSECSQ9HD40 501 aaKnown RBP19.21■□□□□ 0.67
CPSF6-205ENST00000550075 HIGD1AQ9Y241 93 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 ALG5Q9Y673 324 aa19.21■□□□□ 0.67
CPSF6-205ENST00000550075 HYPMO75409 117 aa19.2■□□□□ 0.66
CPSF6-205ENST00000550075 GALR1P47211 349 aa19.2■□□□□ 0.66
CPSF6-205ENST00000550075 PXDC1Q5TGL8 231 aa19.2■□□□□ 0.66
CPSF6-205ENST00000550075 SAMD13Q5VXD3 122 aa19.2■□□□□ 0.66
CPSF6-205ENST00000550075 TMEM182Q6ZP80 229 aaPredicted RBP19.2■□□□□ 0.66
CPSF6-205ENST00000550075 GPR82Q96P67 336 aa19.2■□□□□ 0.66
CPSF6-205ENST00000550075 AGPAT2O15120 278 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 PLP1P60201 277 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 ZNF124Q15973 351 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 ATP6V1FQ16864 119 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 LEMD1Q68G75 181 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 PPP1R1CQ8WVI7 109 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 SLC25A22Q9H936 323 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 RETNQ9HD89 108 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 DOK5Q9P104 306 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 RNF24Q9Y225 148 aa19.19■□□□□ 0.66
CPSF6-205ENST00000550075 ZNF98A6NK75 572 aa19.18■□□□□ 0.66
CPSF6-205ENST00000550075 OR5G3P0C626 314 aa19.18■□□□□ 0.66
CPSF6-205ENST00000550075 MEOX2P50222 304 aa19.18■□□□□ 0.66
CPSF6-205ENST00000550075 STHQ8IWL8 128 aa19.18■□□□□ 0.66
CPSF6-205ENST00000550075 NBEAL2Q6ZNJ1 2754 aa19.18■□□□□ 0.66
CPSF6-205ENST00000550075 ID1P41134 155 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 CAMLGP49069 296 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 VWC2Q2TAL6 325 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 PSMG4Q5JS54 123 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 Q6ZWC4 215 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 ARL6Q9H0F7 186 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 OR5AC2Q9NZP5 309 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 WDR83OSQ9Y284 106 aa19.17■□□□□ 0.66
CPSF6-205ENST00000550075 UBE2L5PA0A1B0GUS4 154 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 H3BRN7 92 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 BAXQ07812 192 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 RGS21Q2M5E4 152 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 MGST2Q99735 147 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 SHANK2-AS3Q9BTD1 123 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 SLC25A39Q9BZJ4 359 aaPredicted RBP19.16■□□□□ 0.66
CPSF6-205ENST00000550075 SLC25A32Q9H2D1 315 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 TP53TG1Q9Y2A0 90 aa19.16■□□□□ 0.66
CPSF6-205ENST00000550075 EWSR1Q01844 656 aaKnown RBP eCLIP19.15■□□□□ 0.66
CPSF6-205ENST00000550075 SCRT1Q9BWW7 348 aa19.15■□□□□ 0.66
CPSF6-205ENST00000550075 MPC2O95563 127 aa19.14■□□□□ 0.65
CPSF6-205ENST00000550075 PSMB3P49720 205 aa19.14■□□□□ 0.65
CPSF6-205ENST00000550075 CSTL1Q9H114 145 aa19.14■□□□□ 0.65
CPSF6-205ENST00000550075 MED28Q9H204 178 aa19.14■□□□□ 0.65
CPSF6-205ENST00000550075 H0YIZ8 118 aa19.13■□□□□ 0.65
CPSF6-205ENST00000550075 COX7A2P2O60397 106 aa19.13■□□□□ 0.65
CPSF6-205ENST00000550075 MPDU1O75352 247 aa19.13■□□□□ 0.65
CPSF6-205ENST00000550075 RPL7P18124 248 aaKnown RBP19.13■□□□□ 0.65
CPSF6-205ENST00000550075 DEFB135Q30KP9 77 aa19.13■□□□□ 0.65
CPSF6-205ENST00000550075 ARV1Q9H2C2 271 aa19.13■□□□□ 0.65
CPSF6-205ENST00000550075 ISLRO14498 428 aa19.12■□□□□ 0.65
CPSF6-205ENST00000550075 Q6ZRG5 221 aa19.12■□□□□ 0.65
CPSF6-205ENST00000550075 OR5C1Q8NGR4 320 aa19.12■□□□□ 0.65
CPSF6-205ENST00000550075 ELOA3CA0A087WX78 387 aaPredicted RBP19.11■□□□□ 0.65
CPSF6-205ENST00000550075 SPRY2O43597 315 aa19.11■□□□□ 0.65
CPSF6-205ENST00000550075 ATF4P18848 351 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms