RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 APC2O95996 2303 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 A0A087X0K7 114 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 A6NJY4 79 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 LTAP01374 205 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 CT83Q5H943 113 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 RBPMS2Q6ZRY4 209 aaKnown RBP11.01□□□□□ -0.65
HDAC7-228ENST00000548938 OR5AN1Q8NGI8 311 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 TPSG1Q9NRR2 321 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-228ENST00000548938 IGLV3-9A0A075B6K5 115 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 CHEK1O14757 476 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 IGHV1-46P01743 117 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 PPBPP02775 128 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 LIPFP07098 398 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 FAM169BQ8N8A8 192 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 SARAFQ96BY9 339 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 MAP1LC3CQ9BXW4 147 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 hADV38S2A0JD32 116 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 CSN3P07498 182 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 FOXE3Q13461 319 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 C12orf54Q6X4T0 127 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 STXBP6Q8NFX7 210 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 FMC1Q96HJ9 113 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 GSX1Q9H4S2 264 aaPredicted RBP11□□□□□ -0.65
HDAC7-228ENST00000548938 ZNF492Q9P255 531 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 SH3BGRL2Q9UJC5 107 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 CEP295Q9C0D2 2601 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 A0A1W2PPI3 338 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 KLK10O43240 276 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 TCRAP04437 139 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 SUB1P53999 127 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC7-228ENST00000548938 TMEM30BQ3MIR4 351 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 OCIAD2Q56VL3 154 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 SEM1Q6ZVN7 128 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
HDAC7-228ENST00000548938 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
HDAC7-228ENST00000548938 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
HDAC7-228ENST00000548938 IGHV3-21A0A0B4J1V1 117 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 FAM87AP0C7U9 286 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 GP9P14770 177 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 PSG9Q00887 426 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 HCP5Q6MZN7 132 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 H1FXQ92522 213 aaKnown RBP10.99□□□□□ -0.65
HDAC7-228ENST00000548938 VPS25Q9BRG1 176 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 Q9H3A6 140 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 DYSFO75923 2080 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 CIARTQ8N365 385 aaPredicted RBP10.99□□□□□ -0.65
HDAC7-228ENST00000548938 OR4C13Q8NGP0 309 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 NDFIP1Q9BT67 221 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
HDAC7-228ENST00000548938 SLC25A17O43808 307 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 APELAP0DMC3 54 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 ZC2HC1AQ96GY0 325 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 ACACAQ13085 2346 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
HDAC7-228ENST00000548938 TOX4O94842 621 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 HLA-DRB1P01911 266 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 OR5AL1P0C617 328 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 ZNF474Q6S9Z5 364 aaPredicted RBP10.98□□□□□ -0.65
HDAC7-228ENST00000548938 Q86TA4 180 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 ZADH2Q8N4Q0 377 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
HDAC7-228ENST00000548938 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 SNAI2O43623 268 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
HDAC7-228ENST00000548938 COL8A1P27658 744 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 RPS20P60866 119 aaKnown RBP10.97□□□□□ -0.65
HDAC7-228ENST00000548938 HIST1H1AQ02539 215 aaPredicted RBP10.97□□□□□ -0.65
HDAC7-228ENST00000548938 OR10X1Q8NGY0 326 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 RITA1Q96K30 269 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.97□□□□□ -0.65
HDAC7-228ENST00000548938 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 FCN3O75636 299 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 ARF6P62330 175 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 IGFL3Q6UXB1 125 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 OR4A5Q8NH83 315 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
HDAC7-228ENST00000548938 CD5LO43866 347 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 HTR1DP28221 377 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 TEX45Q8NA69 505 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 NEU4Q8WWR8 484 aaPredicted RBP10.96□□□□□ -0.65
HDAC7-228ENST00000548938 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
HDAC7-228ENST00000548938 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.65
HDAC7-228ENST00000548938 OVOL3O00110 214 aa10.96□□□□□ -0.66
HDAC7-228ENST00000548938 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.66
HDAC7-228ENST00000548938 GPR183P32249 361 aa10.96□□□□□ -0.66
HDAC7-228ENST00000548938 CCL8P80075 99 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms