RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 TAS2R41P59536 307 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 RAB4BP61018 213 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 UBE2BP63146 152 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 SCGB2B2Q4G0G5 96 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 C1orf137Q5JT78 98 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 BCL2L15Q5TBC7 163 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 SOSTDC1Q6X4U4 206 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 TEX47Q8TBZ9 253 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 NEK7Q8TDX7 302 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 C10orf105Q8TEF2 133 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 LINC00467Q9BRT7 94 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 GID8Q9NWU2 228 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 SSR3Q9UNL2 185 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 UFC1Q9Y3C8 167 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 PCDH15Q96QU1 1955 aa1.24□□□□□ -2.21
PRKDC-205ENST00000535375 PCNTO95613 3336 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 ROCK1Q13464 1354 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 IGKV3-7A0A075B6H7 116 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 A8MWV9 139 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 NDUFB3O43676 98 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 GADD45GO95257 159 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 G0S2P27469 103 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 INSL3P51460 131 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 ROMO1P60602 79 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
PRKDC-205ENST00000535375 SURF2Q15527 256 aaPredicted RBP1.23□□□□□ -2.21
PRKDC-205ENST00000535375 LINC00301Q8NCQ3 95 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 NUP35Q8NFH5 326 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 PCTPQ9UKL6 214 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 CHD8Q9HCK8 2581 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
PRKDC-205ENST00000535375 ADGRB2O60241 1585 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
PRKDC-205ENST00000535375 TIMM17BO60830 172 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
PRKDC-205ENST00000535375 DYNLT3P51808 116 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 PATE2Q6UY27 113 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 GRINAQ7Z429 371 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 CHCHD2Q9Y6H1 151 aaPredicted RBP1.22□□□□□ -2.21
PRKDC-205ENST00000535375 A0A0C4DFX4 3053 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 OBSL1O75147 1896 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 UHRF1BP1Q6BDS2 1440 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 HEATR5BQ9P2D3 2071 aa1.22□□□□□ -2.21
PRKDC-205ENST00000535375 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
PRKDC-205ENST00000535375 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 RIIAD1A6NNX1 92 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 CST8O60676 142 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 HYPMO75409 117 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 BANF1O75531 89 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 DHFRP00374 187 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 CSN2P05814 226 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 CRHP06850 196 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 HLA-EP13747 358 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 NFYBP25208 207 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 KRTAP10-4P60372 401 aaPredicted RBP1.21□□□□□ -2.22
PRKDC-205ENST00000535375 OR10K1Q8NGX5 313 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 PLEKHB2Q96CS7 222 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 MALSU1Q96EH3 234 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 GPX7Q96SL4 187 aaPredicted RBP1.21□□□□□ -2.22
PRKDC-205ENST00000535375 SLC25A21Q9BQT8 299 aaPredicted RBP1.21□□□□□ -2.22
PRKDC-205ENST00000535375 OR2J1Q9GZK6 312 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 BIN3Q9NQY0 253 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 USP9XQ93008 2570 aaPredicted RBP1.21□□□□□ -2.22
PRKDC-205ENST00000535375 ALPK2Q86TB3 2170 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 MYH7BA7E2Y1 1941 aa1.21□□□□□ -2.22
PRKDC-205ENST00000535375 B4DSR2 109 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 M0R2N4 97 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 NEFHP12036 1026 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 TCTAP57738 103 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 VBP1P61758 197 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 TMEM70Q9BUB7 260 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 PBDC1Q9BVG4 233 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 NPCDR1Q9BY65 106 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 C6orf62Q9GZU0 229 aaPredicted RBP1.2□□□□□ -2.22
PRKDC-205ENST00000535375 ANKRD17O75179 2603 aaKnown RBP1.2□□□□□ -2.22
PRKDC-205ENST00000535375 ERCC6L2Q5T890 1561 aa1.2□□□□□ -2.22
PRKDC-205ENST00000535375 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 A0A087WX48 190 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 TRBV6-8A0A0A6YYG3 113 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 PPP5D1E7EU14 171 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 PIAS1O75925 651 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 TRGC2P03986 189 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 OGNP20774 298 aaKnown RBP1.19□□□□□ -2.22
PRKDC-205ENST00000535375 C3orf33Q6P1S2 294 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 INTS1Q8N201 2190 aaKnown RBP1.19□□□□□ -2.22
PRKDC-205ENST00000535375 GPER1Q99527 375 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 RTL8AQ9BWD3 113 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 POPDC3Q9HBV1 291 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 SMPXQ9UHP9 88 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 ASB4Q9Y574 426 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 SNURFQ9Y675 71 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 MYOFQ9NZM1 2061 aa1.19□□□□□ -2.22
PRKDC-205ENST00000535375 PTPN13Q12923 2485 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 CEP164Q9UPV0 1460 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 SYNMO15061 1565 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 YTHDC2Q9H6S0 1430 aaKnown RBP1.18□□□□□ -2.22
PRKDC-205ENST00000535375 TAF1LQ8IZX4 1826 aa1.18□□□□□ -2.22
PRKDC-205ENST00000535375 TLCD2A6NGC4 264 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms