RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 USP9XQ93008 2570 aaPredicted RBP7.38□□□□□ -1.23
SF3B2-216ENST00000534765 ACACBO00763 2458 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 NPIPB5A8MRT5 1133 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 PSPNO60542 156 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 NMSQ5H8A3 153 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 DAZAP1Q96EP5 407 aaKnown RBP7.38□□□□□ -1.23
SF3B2-216ENST00000534765 DSCAML1Q8TD84 2053 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 H3BRM9 83 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 GRPP07492 148 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
SF3B2-216ENST00000534765 ATP5J2P56134 94 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 CATR1Q13166 79 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 Q6P435 159 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 ODF3L1Q8IXM7 274 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 FAM208BQ5VWN6 2430 aa7.38□□□□□ -1.23
SF3B2-216ENST00000534765 KIR2DS1A0A191URI9 304 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 H0YJW9 148 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.37□□□□□ -1.23
SF3B2-216ENST00000534765 KIR2DS4P43632 304 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 KIR2DS1Q14954 304 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 SONP18583 2426 aaKnown RBP7.37□□□□□ -1.23
SF3B2-216ENST00000534765 FAM90A27PA6NNH2 459 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 RRHO14718 337 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 LINC00205P59089 165 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 SFXN3Q9BWM7 321 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 PROCRQ9UNN8 238 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 CSPG4Q6UVK1 2322 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 CXorf1O96002 111 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 ERVK11-1P61568 191 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 SOX21Q9Y651 276 aaPredicted RBP7.37□□□□□ -1.23
SF3B2-216ENST00000534765 ZANQ9Y493 2812 aa7.37□□□□□ -1.23
SF3B2-216ENST00000534765 H0Y980 276 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 K7EN84 100 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 M0R1B8 84 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 SMIM17P0DL12 118 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 TBC1D28Q2M2D7 210 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 COX19Q49B96 90 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 PGLYRP4Q96LB8 373 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 SPAG8Q99932 426 aaPredicted RBP7.36□□□□□ -1.23
SF3B2-216ENST00000534765 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 TRAV5A0A0B4J249 113 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 FOXH1O75593 365 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 IGLV2-14P01704 120 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 COL8A2P25067 703 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 INSL3P51460 131 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 PLP2Q04941 152 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 MKXQ8IYA7 352 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 IL36GQ9NZH8 169 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 YTHDF2Q9Y5A9 579 aaKnown RBP7.36□□□□□ -1.23
SF3B2-216ENST00000534765 ARFGEF3Q5TH69 2177 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 CX3CL1P78423 397 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 BCL6BQ8N143 479 aaPredicted RBP7.36□□□□□ -1.23
SF3B2-216ENST00000534765 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
SF3B2-216ENST00000534765 IQCF6A8MYZ5 107 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 FGF12P61328 243 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 ZFAND6Q6FIF0 208 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 OR2V2Q96R30 315 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 C1QTNF4Q9BXJ3 329 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 ENY2Q9NPA8 101 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 INSIG2Q9Y5U4 225 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 A8MWL6 223 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 GCHFRP30047 84 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 VDAC2P45880 294 aaPredicted RBP7.35□□□□□ -1.23
SF3B2-216ENST00000534765 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 GALMQ96C23 342 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 HSD17B10Q99714 261 aaKnown RBP7.35□□□□□ -1.23
SF3B2-216ENST00000534765 LIN7CQ9NUP9 197 aaKnown RBP7.35□□□□□ -1.23
SF3B2-216ENST00000534765 TRGV10A0A0A0MS01 117 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 PLAUP00749 431 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 C8orf86Q6ZUL3 223 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 GLMPQ8WWB7 406 aa7.35□□□□□ -1.23
SF3B2-216ENST00000534765 IGHV3OR15-7A0A075B7D8 119 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 HCFC1P51610 2035 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 C5orf64Q2M2E5 130 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 GFRALQ6UXV0 394 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 NEGR1Q7Z3B1 354 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 C18orf15Q96N68 181 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 SMPXQ9UHP9 88 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 UBR5O95071 2799 aaPredicted RBP7.34□□□□□ -1.23
SF3B2-216ENST00000534765 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 OR2H2O95918 312 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 OR5AN1Q8NGI8 311 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.34□□□□□ -1.23
SF3B2-216ENST00000534765 ZNF391Q9UJN7 358 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 HIGD1CA8MV81 97 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
SF3B2-216ENST00000534765 CACNG7P62955 275 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 CENPVQ7Z7K6 275 aaPredicted RBP7.34□□□□□ -1.23
SF3B2-216ENST00000534765 NDFIP1Q9BT67 221 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 EPG5Q9HCE0 2579 aa7.34□□□□□ -1.23
SF3B2-216ENST00000534765 FOXE3Q13461 319 aa7.33□□□□□ -1.24
SF3B2-216ENST00000534765 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
SF3B2-216ENST00000534765 CD177Q8N6Q3 437 aa7.33□□□□□ -1.24
SF3B2-216ENST00000534765 OSR1Q8TAX0 266 aaPredicted RBP7.33□□□□□ -1.24
SF3B2-216ENST00000534765 LINC00479Q96M42 142 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms