RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ZNF124Q15973 351 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 LEMD1Q68G75 181 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 RASL11BQ9BPW5 248 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 VKORC1Q9BQB6 163 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 SHANK2-AS3Q9BTD1 123 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
PKP3-202ENST00000524646 SCNM1Q9BWG6 230 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 SLC25A39Q9BZJ4 359 aaPredicted RBP7.09□□□□□ -1.27
PKP3-202ENST00000524646 C1RLQ9NZP8 487 aa7.09□□□□□ -1.27
PKP3-202ENST00000524646 DMDP11532 3685 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 PPIAL4CA0A0B4J2A2 164 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 LY6LH3BQJ8 138 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 H3BTX0 84 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 DLEU1O43261 78 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 PPIAL4GP0DN37 164 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 NBL1P41271 181 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 GPR6P46095 362 aaPredicted RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 DLX1P56177 255 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 GAGE1Q13065 139 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 PLGLAQ15195 96 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 FBXL19-AS1Q494R0 122 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 CYB5R2Q6BCY4 276 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 LINC00322Q6ZN03 302 aaPredicted RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 Q6ZN92 141 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 TMEM75Q8N9X5 138 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 GATD1Q8NB37 220 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 OR2D3Q8NGH3 330 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 DAZAP1Q96EP5 407 aaKnown RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 URB1-AS1Q96HZ7 61 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 SGK494Q96LW2 274 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 TXN2Q99757 166 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
PKP3-202ENST00000524646 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 POLEQ07864 2286 aa7.08□□□□□ -1.28
PKP3-202ENST00000524646 ACACAQ13085 2346 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 RP1L1Q8IWN7 2480 aaPredicted RBP7.07□□□□□ -1.28
PKP3-202ENST00000524646 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 LOC102724200A0A096LPH7 203 aaPredicted RBP7.07□□□□□ -1.28
PKP3-202ENST00000524646 C2orf70A6NJV1 201 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 K7EIM0 57 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 CHEK1O14757 476 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 TIMM23O14925 209 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 NBR2O15453 112 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 IGKV1-17P01599 117 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 LIPFP07098 398 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 COL8A1P27658 744 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 PRB3Q04118 309 aaPredicted RBP7.07□□□□□ -1.28
PKP3-202ENST00000524646 BATFQ16520 125 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 LCN12Q6JVE5 192 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 LHFPL4Q7Z7J7 247 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 LY6G5BQ8NDX9 201 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 OR4F17Q8NGA8 305 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 ONECUT1Q9UBC0 465 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 APC2O95996 2303 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 ROS1P08922 2347 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 CEP250Q9BV73 2442 aa7.07□□□□□ -1.28
PKP3-202ENST00000524646 TTC28Q96AY4 2481 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 IGHV1-24A0A0C4DH33 117 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 A0A1B0GW15 77 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 FAM90A27PA6NNH2 459 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 LYNX1G3V0Z9 82 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 K7EQM0 130 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 HAX1O00165 279 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 NDUFA3O95167 84 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 APOHP02749 345 aaPredicted RBP7.06□□□□□ -1.28
PKP3-202ENST00000524646 LYNX1P0DP58 116 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 ZNF672Q499Z4 452 aaPredicted RBP7.06□□□□□ -1.28
PKP3-202ENST00000524646 Q56UQ5 140 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 PRNTQ86SH4 94 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 BPIFA4PQ86YQ2 179 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 ATOH7Q8N100 152 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 LYPD1Q8N2G4 141 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 MUC15Q8N387 334 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 CFHR4Q92496 578 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 ZNF48Q96MX3 618 aaPredicted RBP7.06□□□□□ -1.28
PKP3-202ENST00000524646 CLEC5AQ9NY25 188 aa7.06□□□□□ -1.28
PKP3-202ENST00000524646 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
PKP3-202ENST00000524646 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
PKP3-202ENST00000524646 ODF3BA8MYP8 253 aa7.05□□□□□ -1.28
PKP3-202ENST00000524646 M0R1W7 72 aa7.05□□□□□ -1.28
PKP3-202ENST00000524646 MRPS12O15235 138 aaKnown RBP7.05□□□□□ -1.28
PKP3-202ENST00000524646 SIAH2O43255 324 aa7.05□□□□□ -1.28
PKP3-202ENST00000524646 CNIH1O95406 144 aa7.05□□□□□ -1.28
PKP3-202ENST00000524646 LINC00614P0C842 121 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms