RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 UBAC2Q8NBM4 344 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 CHST4Q8NCG5 386 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 OR2M3Q8NG83 312 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 OR4C16Q8NGL9 310 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 OR51E1Q8TCB6 317 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 IL1F10Q8WWZ1 152 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 MALSU1Q96EH3 234 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 LINC00477Q96M19 166 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 S100A13Q99584 98 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 SULT4A1Q9BR01 284 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
PABPC1-223ENST00000523636 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 HEXA-AS1Q9H8Q6 139 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF256Q9Y2P7 627 aaPredicted RBP3.93□□□□□ -1.78
PABPC1-223ENST00000523636 HDGFL3Q9Y3E1 203 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 IGLV3-32A0A0A0MS00 114 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 KANTRA0A1W2PQU2 76 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 CIB4A0PJX0 185 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 OR5H14A6NHG9 310 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 HMGB3O15347 200 aaKnown RBP3.92□□□□□ -1.78
PABPC1-223ENST00000523636 HPRT1P00492 218 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 CD3DP04234 171 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 PFN1P07737 140 aaKnown RBP3.92□□□□□ -1.78
PABPC1-223ENST00000523636 PGA4P0DJD7 388 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 PGA3P0DJD8 388 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 PGA5P0DJD9 388 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SLC25A4P12235 298 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 CTLA4P16410 223 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 BCL3P20749 454 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 S100A2P29034 98 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 TSPOP30536 169 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 RPS27AP62979 156 aaKnown RBP3.92□□□□□ -1.78
PABPC1-223ENST00000523636 EIF5AP63241 154 aaKnown RBP3.92□□□□□ -1.78
PABPC1-223ENST00000523636 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 GSG1LQ6UXU4 331 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 FBXW12Q6X9E4 464 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 TMPPEQ6ZT21 453 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SSX8Q7RTT4 187 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 NAA40Q86UY6 237 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 C1orf174Q8IYL3 243 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SVBPQ8N300 66 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SLAMF6Q96DU3 332 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SEC22AQ96IW7 307 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 LINC00052Q96N35 136 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 SLC25A33Q9BSK2 321 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 TAS2R4Q9NYW5 299 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 MCTS1Q9ULC4 181 aaKnown RBP3.92□□□□□ -1.78
PABPC1-223ENST00000523636 POLR1DQ9Y2S0 133 aa3.92□□□□□ -1.78
PABPC1-223ENST00000523636 A0A087WX48 190 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 FXYD6-FXYD2A0A087WZ82 144 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 A0A0B4J2A0 478 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 LOC107986453A0A1B0GWG9 222 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 A6NDN8 102 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GAGE7O76087 117 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 MPC2O95563 127 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 IGHV3-9P01782 118 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GAGE12FP0CL80 117 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GAGE12GP0CL81 117 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GAGE12IP0CL82 117 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GNB3P16520 340 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 CXCL2P19875 107 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 FGF7P21781 194 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GLRXP35754 106 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF93P35789 620 aaPredicted RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 BRWD1-AS2P59051 145 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 HSPE1P61604 102 aaKnown RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 BAXQ07812 192 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GAGE4Q13068 117 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF345Q14585 488 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 SCGB2B2Q4G0G5 96 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 PYY3Q5JQD4 70 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 EIF5AL1Q6IS14 154 aaKnown RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 TRAPPC6BQ86SZ2 158 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 SLC25A42Q86VD7 318 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 NDUFA11Q86Y39 141 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ODF3L1Q8IXM7 274 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF101Q8IZC7 436 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OSR2Q8N2R0 312 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OR51G1Q8NGK1 321 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OR10G4Q8NGN3 311 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OR2K2Q8NGT1 345 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OR10R2Q8NGX6 335 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 OR10AC1Q8NH08 325 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 ZNRF2Q8NHG8 242 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 TMED6Q8WW62 240 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 AQP3Q92482 292 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 APOBEC3DQ96AK3 386 aaPredicted RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GALMQ96C23 342 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 RPUSD4Q96CM3 377 aaKnown RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 PHYHIPLQ96FC7 376 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 AMELYQ99218 206 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 GPER1Q99527 375 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 RTBDNQ9BSG5 229 aaPredicted RBP3.91□□□□□ -1.78
PABPC1-223ENST00000523636 PBOV1Q9GZY1 135 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 FXYD6Q9H0Q3 95 aa3.91□□□□□ -1.78
PABPC1-223ENST00000523636 CST11Q9H112 138 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms