RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 MED1Q15648 1581 aaPredicted RBP-3.29□□□□□ -2.94
RNU6-542P-201ENST00000516405 SERTM2A0A1B0GWG4 89 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 G3V318 75 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 RNF13O43567 381 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 ENSAO43768 121 aaKnown RBP-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 ATP5G1P05496 136 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 ADORA1P30542 326 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 AGTR1P30556 359 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 HBA1P69905 142 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TNFAIP6P98066 277 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 CDK6Q00534 326 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 FABP5Q01469 135 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TTC33Q6PID6 262 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TMEM14EPQ6UXP3 125 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 ZNF321PQ8N8H1 164 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 MCFD2Q8NI22 146 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 FAM45AQ8TCE6 357 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 MYCBPQ99417 103 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 SDF2Q99470 211 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 ERP44Q9BS26 406 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TP53AIP1Q9HCN2 124 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TMEM242Q9NWH2 141 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 SDHAF2Q9NX18 166 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 TAS2R3Q9NYW6 316 aa-3.3□□□□□ -2.94
RNU6-542P-201ENST00000516405 C9orf170A2RU37 121 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 EFCAB9A8MZ26 197 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 ASS1P00966 412 aaKnown RBP-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 EIF5AP63241 154 aaKnown RBP-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 KRTAP19-5Q3LI72 72 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 BEX5Q5H9J7 111 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 IQCF2Q8IXL9 164 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 CDKL2Q92772 493 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 ATP6V1E2Q96A05 226 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 PACRGQ96M98 296 aaPredicted RBP-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 PANX1Q96RD7 426 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 NAT8BQ9UHF3 227 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 AK3Q9UIJ7 227 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 HDGFL3Q9Y3E1 203 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 PDE4DIPQ5VU43 2346 aa-3.31□□□□□ -2.94
RNU6-542P-201ENST00000516405 GOLGA4Q13439 2230 aaKnown RBP-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 A0A1W2PRQ8 180 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 C7orf71A4D174 169 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIGD1CA8MV81 97 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 CCRL2O00421 344 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 CDIPTO14735 213 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 BCE1O60756 84 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 MTX2O75431 263 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 PIAS1O75925 651 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 GYPBP06028 91 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 PMCHP20382 165 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 SNRPD3P62318 126 aaKnown RBP-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 MIR22HGQ0VDD5 57 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 TRAM1Q15629 374 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 CSAG1Q6PB30 78 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 UNQ5815/PRO19632Q6UWF5 114 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 MRPL21Q7Z2W9 205 aaKnown RBP-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 PID1Q7Z2X4 250 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 CMTM8Q8IZV2 173 aa-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 UTP11Q9Y3A2 253 aaKnown RBP-3.32□□□□□ -2.94
RNU6-542P-201ENST00000516405 KNDC1Q76NI1 1749 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 CDK12Q9NYV4 1490 aaPredicted RBP-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 TRBV6-1A0A0K0K1D8 114 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 APOC4-APOC2K7ER74 178 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 MAP3K7CLP57077 242 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 DYNLT1P63172 113 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 HPCAP84074 193 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 ACTL10Q5JWF8 245 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 ARPINQ7Z6K5 226 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 OR13C4Q8NGS5 318 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 OR2T10Q8NGZ9 312 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 ASCL3Q9NQ33 180 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 ERGIC3Q9Y282 383 aa-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 SPTBN5Q9NRC6 3674 aaKnown RBP-3.33□□□□□ -2.94
RNU6-542P-201ENST00000516405 A0A096LPI6 279 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 CXCR6O00574 342 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 SLC16A4O15374 487 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 OR4E1P0C645 316 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BOP23527 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BBP33778 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 RPA3P35244 121 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 DEKP35659 375 aaKnown RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 RGS8P57771 180 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BDP58876 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 VBP1P61758 197 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BCP62807 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 IFITM2Q01629 132 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 INSL4Q14641 139 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 JOSD1Q15040 202 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 TSNQ15631 228 aaKnown RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 SSX2Q16385 188 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST2H2BEQ16778 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 C18orf21Q32NC0 220 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST2H2BFQ5QNW6 126 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 Q6ZT83 130 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BHQ93079 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 SLAMF6Q96DU3 332 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 MRAP2Q96G30 205 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BNQ99877 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 HIST1H2BMQ99879 126 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 ELOVL6Q9H5J4 265 aa-3.34□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms