RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TMEM182Q6ZP80 229 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-209ENST00000487617 OR8I2Q8N0Y5 310 aa14.93□□□□□ -0.02
HDAC4-209ENST00000487617 TBC1D24Q9ULP9 559 aa14.93□□□□□ -0.02
HDAC4-209ENST00000487617 RCL1Q9Y2P8 373 aaKnown RBP14.93□□□□□ -0.02
HDAC4-209ENST00000487617 JTBO76095 146 aa14.92□□□□□ -0.02
HDAC4-209ENST00000487617 GIG44P09565 113 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-209ENST00000487617 TAS2R30P59541 319 aa14.92□□□□□ -0.02
HDAC4-209ENST00000487617 TMEM41BQ5BJD5 291 aa14.92□□□□□ -0.02
HDAC4-209ENST00000487617 OR10P1Q8NGE3 313 aa14.92□□□□□ -0.02
HDAC4-209ENST00000487617 WDR12Q9GZL7 423 aaKnown RBP14.92□□□□□ -0.02
HDAC4-209ENST00000487617 SLC45A2Q9UMX9 530 aa14.92□□□□□ -0.02
HDAC4-209ENST00000487617 CSMD3Q7Z407 3707 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 RYR3Q15413 4870 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 C5orf51A6NDU8 294 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 TSC22D2O75157 780 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 C4BPBP20851 252 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 ID1P41134 155 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 DLK1P80370 383 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 CYP2G1PQ6ZSU1 146 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 C12orf45Q8N5I9 185 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-209ENST00000487617 OR1B1Q8NGR6 318 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 LINC00052Q96N35 136 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 TMEM147Q9BVK8 224 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 SLC25A22Q9H936 323 aa14.91□□□□□ -0.02
HDAC4-209ENST00000487617 IL5P05113 134 aa14.9□□□□□ -0.02
HDAC4-209ENST00000487617 ASAH1Q13510 395 aa14.9□□□□□ -0.02
HDAC4-209ENST00000487617 MGAT4CQ9UBM8 478 aa14.9□□□□□ -0.02
HDAC4-209ENST00000487617 C7orf66A4D0T2 115 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 NUPR2A6NF83 97 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 ZNF98A6NK75 572 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 L7N2F9 121 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 S100A7P31151 101 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 GALR1P47211 349 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 PSMB3P49720 205 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 VAMP2P63027 116 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 GSG1LQ6UXU4 331 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 SLC25A32Q9H2D1 315 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 C11orf68Q9H3H3 251 aaKnown RBP14.89□□□□□ -0.03
HDAC4-209ENST00000487617 NPVFQ9HCQ7 196 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 PTTG2Q9NZH5 202 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 DOK5Q9P104 306 aa14.89□□□□□ -0.03
HDAC4-209ENST00000487617 LSM5Q9Y4Y9 91 aaKnown RBP14.89□□□□□ -0.03
HDAC4-209ENST00000487617 AGRNO00468 2067 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 FNDC10F2Z333 226 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 H3BMM0 161 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 SOCS3O14543 225 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 DEFB4AO15263 64 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 NUTF2P61970 127 aaKnown RBP14.88□□□□□ -0.03
HDAC4-209ENST00000487617 CLEC5AQ9NY25 188 aa14.88□□□□□ -0.03
HDAC4-209ENST00000487617 K7EPK0 472 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 UPK1BO75841 260 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 HLA-DRB4P13762 266 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 SELENOTP62341 195 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 ARL16Q0P5N6 197 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 CEMP1Q6PRD7 247 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-209ENST00000487617 C2orf50Q96LR7 162 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 RSG1Q9BU20 258 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 HLA-DRB4X5D2U9 266 aa14.87□□□□□ -0.03
HDAC4-209ENST00000487617 DYNC2H1Q8NCM8 4307 aaKnown RBP14.86□□□□□ -0.03
HDAC4-209ENST00000487617 ISLRO14498 428 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 LINC00869P0C866 280 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 MEOX2P50222 304 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 BCAP31P51572 246 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 DEFB1P60022 68 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 RAP2BP61225 183 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 GDF5OSQ5U4N7 250 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 SAMD13Q5VXD3 122 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 TEPPQ6URK8 271 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 C11orf45Q8TAV5 145 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 ENKURQ8TC29 256 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 GPR82Q96P67 336 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 SCRT1Q9BWW7 348 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 HIGD1AQ9Y241 93 aa14.86□□□□□ -0.03
HDAC4-209ENST00000487617 H3BRN7 92 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 HYPMO75409 117 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 IGKV3-20P01619 116 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 FOXI2Q6ZQN5 318 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 Q8NAQ8 132 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 CSNK1G2-AS1Q8NCQ2 148 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 C16orf92Q96LL3 132 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 GGACTQ9BVM4 153 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 C1QTNF4Q9BXJ3 329 aa14.85□□□□□ -0.03
HDAC4-209ENST00000487617 SLC25A39Q9BZJ4 359 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-209ENST00000487617 SAV1Q9H4B6 383 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-209ENST00000487617 KLK5Q9Y337 293 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-209ENST00000487617 IGHV4-28A0A0C4DH34 117 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 ZNF705EA8MWA4 302 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-209ENST00000487617 DEDDO75618 318 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 OR5G3P0C626 314 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 CAV2P51636 162 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 PLP1P60201 277 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 NANOS2P60321 138 aaKnown RBP14.84□□□□□ -0.03
HDAC4-209ENST00000487617 S100A10P60903 97 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 SLC38A11Q08AI6 406 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 PHLDA1Q8WV24 401 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-209ENST00000487617 SHANK2-AS3Q9BTD1 123 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
HDAC4-209ENST00000487617 MIFP14174 115 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms