RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 KLF5Q13887 457 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 MPV17LQ2QL34 196 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM30BQ3MIR4 351 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 SOHLH1Q5JUK2 328 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 RPL7L1Q6DKI1 246 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 LCN12Q6JVE5 192 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 LINC00322Q6ZN03 302 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF833PQ6ZTB9 187 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 MRPL52Q86TS9 123 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 LGI3Q8N145 548 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 DEFB125Q8N687 156 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 ADAD2Q8NCV1 583 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 MAFIPQ8WZ33 124 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM230Q96A57 120 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 RTBDNQ9BSG5 229 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 ST6GALNAC5Q9BVH7 336 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 EIF5A2Q9GZV4 153 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 SRD5A3Q9H8P0 318 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 RAB9BQ9NP90 201 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 IL36GQ9NZH8 169 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 PPP1R2P9O14990 202 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 PITX3O75364 302 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 DFFBO76075 338 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 CNIH1O95406 144 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 CA2P00918 260 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 TRBV12-3P01733 135 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 PMP2P02689 132 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 CSN3P07498 182 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 CD7P09564 240 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 AREGP15514 252 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 HIST1H1BP16401 226 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 GNB3P16520 340 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 AKR1C2P52895 323 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 S100A10P60903 97 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 PKIAP61925 76 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 AKR1C1Q04828 323 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 MOGAT2Q3SYC2 334 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 AKIRIN2Q53H80 203 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 KHDC3LQ587J8 217 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 RPL39P5Q59GN2 51 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 AADACL3Q5VUY0 350 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC25A24Q6NUK1 477 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 LINC00596Q86U02 117 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 OR5T1Q8NG75 326 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 IL22RA2Q969J5 263 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 DAZAP1Q96EP5 407 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 NIPSNAP3BQ9BS92 247 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 IFI27L2Q9H2X8 130 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 SPACA1Q9HBV2 294 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 EHFQ9NZC4 300 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 KCNIP1Q9NZI2 227 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 OR5AC2Q9NZP5 309 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 JPT1Q9UK76 154 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
TMEM39A-209ENST00000486235 MSGN1A6NI15 193 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 FOXI3A8MTJ6 420 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 H0YJW9 148 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 YPEL1O60688 119 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 ADAP1O75689 374 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 CRTAPO75718 401 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 DIRAS3O95661 229 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 IFNA1P01562 189 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 PRH1P02810 166 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 CT45A6P0DMU7 189 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 CT45A5P0DMU8 189 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 CT45A7P0DMV0 189 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 SLC25A6P12236 298 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 RAB4AP20338 218 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 S100GP29377 79 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 CEACAM6P40199 344 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 FXYD3Q14802 87 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 GGNBP1Q5YKI7 109 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 Q6ZS49 121 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 GAPTQ8N292 157 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 GVQW1Q8N7I0 195 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 MRPL30Q8TCC3 161 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 RNASEH2CQ8TDP1 164 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 TVP23CQ96ET8 276 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 OR10C1Q96KK4 312 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 YPEL4Q96NS1 127 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 YPEL2Q96QA6 119 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 BANF2Q9H503 90 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 NAA60Q9H7X0 242 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 PEF1Q9UBV8 284 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 WASHC3Q9Y3C0 194 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 SELENOKQ9Y6D0 94 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 KMT2AQ03164 3969 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 RYR1P21817 5038 aa4.83□□□□□ -1.64
TMEM39A-209ENST00000486235 TRBV24-1A0A075B6N3 115 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 A0A0G2JLM5 398 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 NUPR2A6NF83 97 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 RBFOX3A6NFN3 312 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 OR11H12B2RN74 326 aa4.82□□□□□ -1.64
TMEM39A-209ENST00000486235 CLN5O75503 358 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms