RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 P0DMU3 169 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 S100A7AQ86SG5 101 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 LRTM2Q8N967 370 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 GPR82Q96P67 336 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 SAV1Q9H4B6 383 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 RFNGQ9Y644 331 aa10.43□□□□□ -0.74
SMARCE1-209ENST00000478349 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 IAPPP10997 89 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 ZNF90Q03938 601 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 BPIFCQ8NFQ6 507 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 FAM210BQ96KR6 192 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 SOSTQ9BQB4 213 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
SMARCE1-209ENST00000478349 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 SYNGR2O43760 224 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 PITX3O75364 302 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 ZNF705DP0CH99 300 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 ZNF705BP0CI00 300 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 INPP1P49441 399 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 UBE2MP61081 183 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 TRIM63Q969Q1 353 aa10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-209ENST00000478349 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 IGHV3OR16-12A0A075B7B8 117 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 CCDC160A6NGH7 325 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 IGKV3-20P01619 116 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 HBE1P02100 147 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 PAX9P55771 341 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 PSG9Q00887 426 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 OR2F1Q13607 317 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 THAP8Q8NA92 274 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 OR4D5Q8NGN0 318 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 OR1B1Q8NGR6 318 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 TMEM147Q9BVK8 224 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
SMARCE1-209ENST00000478349 WRBO00258 174 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 SFT2D2O95562 160 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 EMP1P54849 157 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 ZNF79Q15937 498 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 SPANXN2Q5MJ10 180 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 WDR12Q9GZL7 423 aaKnown RBP10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 SLC25A22Q9H936 323 aa10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 STRAPQ9Y3F4 350 aaKnown RBP10.39□□□□□ -0.75
SMARCE1-209ENST00000478349 SOCS3O14543 225 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 IFNA21P01568 189 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 PPP1R1AQ13522 171 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 SPANXN5Q5MJ07 72 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 DOK5Q9P104 306 aa10.38□□□□□ -0.75
SMARCE1-209ENST00000478349 A0A0J9YX75 114 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 NAP1L6A6NFF2 107 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 HOXB5P09067 269 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 RAP2BP61225 183 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 TRIQKQ629K1 86 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 ZNF767PQ75MW2 155 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 UBE2DNLQ8IWF7 75 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 MAGT1Q9H0U3 335 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 V9GYH0 126 aa10.37□□□□□ -0.75
SMARCE1-209ENST00000478349 LOC102723971A0A1B0GUV8 181 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 ORM2P19652 201 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 FXYD7P58549 80 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 B2MP61769 119 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 SELENOTP62341 195 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 OXA1LQ15070 435 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 ACOT7LQ6ZUV0 252 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 ZNF709Q8N972 641 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 NIPSNAP3BQ9BS92 247 aa10.36□□□□□ -0.75
SMARCE1-209ENST00000478349 IGKV1OR2-108A0A075B7D4 117 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 CENPXA8MT69 81 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 INSP01308 110 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 FAM222AQ5U5X8 452 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 TMEM144Q7Z5S9 345 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 RSG1Q9BU20 258 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 SLC25A32Q9H2D1 315 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
SMARCE1-209ENST00000478349 PRSS46E5RG02 174 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 H3BP45 60 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 IL5P05113 134 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 CCDC190Q86UF4 302 aa10.34□□□□□ -0.75
SMARCE1-209ENST00000478349 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms