RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GRAMD2BQ96HH9 432 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 SEC22AQ96IW7 307 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 NDUFAF3Q9BU61 184 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 FNDC4Q9H6D8 234 aaPredicted RBP3.22□□□□□ -1.89
CKS1B-207ENST00000477676 AUNIPQ9H7T9 357 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 SCN3BQ9NY72 215 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 XCL2Q9UBD3 114 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 DAPK2Q9UIK4 370 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 TBC1D24Q9ULP9 559 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
CKS1B-207ENST00000477676 PUS1Q9Y606 427 aaKnown RBP eCLIP3.22□□□□□ -1.89
CKS1B-207ENST00000477676 IGLV5-37A0A075B6J1 123 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 LOC100506127A0A0U1RQW1 187 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 DNASE2O00115 360 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 IGKV1-17P01599 117 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 P0C879 139 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 STAG3L3P0CL85 134 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 SPP1P10451 314 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 MYL9P24844 172 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 CRYBB3P26998 211 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 FGF9P31371 208 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 TSPAN5P62079 268 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 PAFAH1B2P68402 229 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 CATR1Q13166 79 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 ARL6IP1Q15041 203 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 KCTD21Q4G0X4 260 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 SFXN4Q6P4A7 337 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 DHRS11Q6UWP2 260 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF705AQ6ZN79 300 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 HSD17B13Q7Z5P4 300 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 DUSP18Q8NEJ0 188 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 STXBP6Q8NFX7 210 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 OR5AP2Q8NGF4 316 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 ENKURQ8TC29 256 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 PINX1Q96BK5 328 aaKnown RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 MOB3AQ96BX8 217 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 TPPP3Q9BW30 176 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 CCDC90BQ9GZT6 254 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 TXNL4BQ9NX01 149 aaKnown RBP3.21□□□□□ -1.9
CKS1B-207ENST00000477676 RABAC1Q9UI14 185 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 TPRKBQ9Y3C4 175 aa3.21□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF705FA8MVS1 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 C16orf90A8MZG2 172 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ANKRD65E5RJM6 399 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 H3BMM0 161 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GNG7O60262 68 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 SNAPC5O75971 98 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE7O76087 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 IFNA10P01566 189 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 IGKV1-5P01602 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 APOA1P02647 267 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PMP2P02689 132 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PRM2P04554 102 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF705DP0CH99 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF705BP0CI00 300 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE12FP0CL80 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE12GP0CL81 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE12IP0CL82 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 RNASE2P10153 161 aaKnown RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 SDC2P34741 201 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 TGFBR1P36897 503 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 P2RY1P47900 373 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 FXYD7P58549 80 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ERVK-16P61578 105 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 MXD1Q05195 221 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE1Q13065 139 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GAGE4Q13068 117 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 IL18Q14116 193 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 TIGITQ495A1 244 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PHLDA2Q53GA4 152 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PSMG4Q5JS54 123 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF709Q8N972 641 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 SLC24A4Q8NFF2 622 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PPP1R14BQ96C90 147 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 TMEM56Q96MV1 263 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF2Q9BSG1 426 aaPredicted RBP3.2□□□□□ -1.9
CKS1B-207ENST00000477676 SCRT2Q9NQ03 307 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 EHFQ9NZC4 300 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 PRNDQ9UKY0 176 aa3.2□□□□□ -1.9
CKS1B-207ENST00000477676 A0A0G2JRQ6 117 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 FAM90A26D6RGX4 464 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 GPR31O00270 319 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 CYB5BO43169 146 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 CD5P06127 495 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 ELK1P19419 428 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 NPPCP23582 126 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 RANBP1P43487 201 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 HSPA13P48723 471 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 CAMLGP49069 296 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 EMP1P54849 157 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 HERV-K104P61576 105 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 VBP1P61758 197 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 DHRS2Q13268 280 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms