RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 ADGRG4Q8IZF6 3080 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 COL12A1Q99715 3063 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 SONP18583 2426 aaKnown RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 A6NDX4 124 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 CEBPZOSA8MTT3 80 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 UPK2O00526 184 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 FGF16O43320 207 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 TCF21O43680 179 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 OR2F2O95006 317 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 OR2A4O95047 310 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 CNIH1O95406 144 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 IFNA17P01571 189 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 IGLV2-23P01705 113 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1-16P04430 117 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 SAA1P0DJI8 122 aaPredicted RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 SULT1A3P0DMM9 295 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 SULT1A4P0DMN0 295 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 CNTFRP26992 372 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 MAS1LP35410 378 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 UBE2KP61086 200 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 RRAS2P62070 204 aaPredicted RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 RPL8P62917 257 aaKnown RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 SMCO1Q147U7 214 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 TNXAQ16473 311 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 POU2AF1Q16633 256 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 C5orf64Q2M2E5 130 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 IAH1Q2TAA2 248 aaPredicted RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 UFSP1Q6NVU6 142 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 LYZL2Q7Z4W2 148 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 PPP1R27Q86WC6 154 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 VKORC1L1Q8N0U8 176 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 PUSL1Q8N0Z8 303 aaKnown RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 NPBQ8NG41 125 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 OR4A5Q8NH83 315 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 LINC01006Q8NI28 216 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 LHFPL5Q8TAF8 219 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 SEC22AQ96IW7 307 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 RBM14Q96PK6 669 aaKnown RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 OR2A7Q96R45 310 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 HINT2Q9BX68 163 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 COMMD5Q9GZQ3 224 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.69□□□□□ -1.98
UBR3-209ENST00000477461 BET1LQ9NYM9 111 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 GSKIPQ9P0R6 139 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 CACFD1Q9UGQ2 172 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 PRNDQ9UKY0 176 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 SIGLEC9Q9Y336 463 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 PDZD2O15018 2839 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 LRBAP50851 2863 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 FBN2P35556 2912 aa2.69□□□□□ -1.98
UBR3-209ENST00000477461 TET2Q6N021 2002 aaPredicted RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 PLXNB1O43157 2135 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 TNCP24821 2201 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 TRAV3A0A0B4J244 114 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 ZFP92A6NM28 416 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 CLDN34H7C241 214 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 L7N2F9 121 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 CHST1O43916 411 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 MED6O75586 246 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 ADAP1O75689 374 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 NDUFA3O95167 84 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 SIX6O95475 246 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 CA2P00918 260 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1-39P01597 117 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1-5P01602 117 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 IGHV3-23P01764 117 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 HLA-DRB1P01911 266 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 RLN2P04090 185 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1D-39P04432 117 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 TRAPPC2P0DI81 140 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 TRAPPC2BP0DI82 140 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 PET100P0DJ07 73 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 SLC25A6P12236 298 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 HLA-GP17693 338 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 PVALBP20472 110 aaPredicted RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 RPL27AP46776 148 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 OR2B8PP59922 312 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 S100A10P60903 97 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 HSPE1P61604 102 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 RPL32P62910 135 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 UBA52P62987 128 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 TMEM267Q0VDI3 215 aaPredicted RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 FXYD3Q14802 87 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 PRSS8Q16651 343 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 NMSQ5H8A3 153 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 SLC35E3Q7Z769 313 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 FAM71E2Q8N5Q1 922 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 Q8N6K4 173 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 C5orf56Q8N8D9 126 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 Q8N9W7 124 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 OR1L8Q8NGR8 309 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 OR5B3Q8NH48 314 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 GRPEL2Q8TAA5 225 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 TMEM167AQ8TBQ9 72 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 PIFOQ8TCI5 191 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 SRSF12Q8WXF0 261 aaKnown RBP2.68□□□□□ -1.98
UBR3-209ENST00000477461 ASB13Q8WXK3 278 aa2.68□□□□□ -1.98
UBR3-209ENST00000477461 ARPC1AQ92747 370 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms