RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 C9JQL5 133 aa22.28■■□□□ 1.16
VEGFA-211ENST00000476772 GCHFRP30047 84 aa22.28■■□□□ 1.16
VEGFA-211ENST00000476772 ARL3P36405 182 aa22.28■■□□□ 1.16
VEGFA-211ENST00000476772 PMS2P11Q13670 270 aa22.28■■□□□ 1.16
VEGFA-211ENST00000476772 OR5AU1Q8NGC0 362 aa22.28■■□□□ 1.16
VEGFA-211ENST00000476772 LOC102723971A0A1B0GUV8 181 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 OR7C2O60412 319 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 IFNA1P01562 189 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 BCL2P10415 239 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 S100A1P23297 94 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 PSMB3P49720 205 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 PEA15Q15121 130 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 ZNF506Q5JVG8 444 aa22.27■■□□□ 1.16
VEGFA-211ENST00000476772 NARS2Q96I59 477 aaKnown RBP22.27■■□□□ 1.16
VEGFA-211ENST00000476772 SLC25A39Q9BZJ4 359 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-211ENST00000476772 ANKRD34BA5PLL1 514 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 ICAM4Q14773 271 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 PQLC2Q6ZP29 291 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 KLHDC1Q8N7A1 406 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 CRLF1O75462 422 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 TOMM20LQ6UXN7 152 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 RNF152Q8N8N0 203 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 MYOZ3Q8TDC0 251 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 OR5B12Q96R08 314 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 ZFAND3Q9H8U3 227 aa22.26■■□□□ 1.15
VEGFA-211ENST00000476772 RELQ04864 619 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-211ENST00000476772 LEMD1Q68G75 181 aa22.25■■□□□ 1.15
VEGFA-211ENST00000476772 RXFP4Q8TDU9 374 aa22.25■■□□□ 1.15
VEGFA-211ENST00000476772 MANBALQ9NQG1 85 aa22.25■■□□□ 1.15
VEGFA-211ENST00000476772 SETXQ7Z333 2677 aaKnown RBP22.25■■□□□ 1.15
VEGFA-211ENST00000476772 NSD1Q96L73 2696 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-211ENST00000476772 FN1P02751 2386 aaKnown RBP22.24■■□□□ 1.15
VEGFA-211ENST00000476772 IGHV3OR16-8A0A075B7F1 116 aa22.24■■□□□ 1.15
VEGFA-211ENST00000476772 LINC00052Q96N35 136 aa22.24■■□□□ 1.15
VEGFA-211ENST00000476772 H3BRN7 92 aa22.23■■□□□ 1.15
VEGFA-211ENST00000476772 SHANK2-AS3Q9BTD1 123 aa22.23■■□□□ 1.15
VEGFA-211ENST00000476772 OR10J4P0C629 311 aa22.23■■□□□ 1.15
VEGFA-211ENST00000476772 PPT1P50897 306 aa22.23■■□□□ 1.15
VEGFA-211ENST00000476772 C16orf95Q9H693 158 aa22.23■■□□□ 1.15
VEGFA-211ENST00000476772 TMEM218A2RU14 115 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 BMPR1BO00238 502 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 PAGE4O60829 102 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 PYYP10082 97 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 UBE2G2P60604 165 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 PAXXQ9BUH6 204 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 OR51M1Q9H341 326 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 VAX2Q9UIW0 290 aa22.22■■□□□ 1.15
VEGFA-211ENST00000476772 TCF21O43680 179 aa22.21■■□□□ 1.15
VEGFA-211ENST00000476772 TMEM167BQ9NRX6 74 aa22.21■■□□□ 1.15
VEGFA-211ENST00000476772 PEF1Q9UBV8 284 aaKnown RBP22.21■■□□□ 1.15
VEGFA-211ENST00000476772 RABAC1Q9UI14 185 aa22.21■■□□□ 1.15
VEGFA-211ENST00000476772 F8P00451 2351 aa22.21■■□□□ 1.15
VEGFA-211ENST00000476772 UBE2L3P68036 154 aaKnown RBP22.2■■□□□ 1.15
VEGFA-211ENST00000476772 SMDT1Q9H4I9 107 aa22.2■■□□□ 1.15
VEGFA-211ENST00000476772 FAM209BQ5JX69 171 aa22.2■■□□□ 1.14
VEGFA-211ENST00000476772 LINC01006Q8NI28 216 aa22.2■■□□□ 1.14
VEGFA-211ENST00000476772 UBE2E2Q96LR5 201 aa22.2■■□□□ 1.14
VEGFA-211ENST00000476772 KRBOX1C9JBD0 128 aa22.19■■□□□ 1.14
VEGFA-211ENST00000476772 HSPB1P04792 205 aaKnown RBP22.19■■□□□ 1.14
VEGFA-211ENST00000476772 SFTA3P0C7M3 94 aa22.19■■□□□ 1.14
VEGFA-211ENST00000476772 ZP3P21754 424 aa22.19■■□□□ 1.14
VEGFA-211ENST00000476772 ZNF98A6NK75 572 aa22.18■■□□□ 1.14
VEGFA-211ENST00000476772 TAGLN2P37802 199 aaKnown RBP22.18■■□□□ 1.14
VEGFA-211ENST00000476772 MEF2BQ02080 365 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-211ENST00000476772 S100A7AQ86SG5 101 aa22.18■■□□□ 1.14
VEGFA-211ENST00000476772 STXBP6Q8NFX7 210 aa22.18■■□□□ 1.14
VEGFA-211ENST00000476772 SUN5Q8TC36 379 aa22.18■■□□□ 1.14
VEGFA-211ENST00000476772 WIPF2Q8TF74 440 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-211ENST00000476772 FXYD5Q96DB9 178 aa22.18■■□□□ 1.14
VEGFA-211ENST00000476772 YTHDF2Q9Y5A9 579 aaKnown RBP22.18■■□□□ 1.14
VEGFA-211ENST00000476772 CLPSL1A2RUU4 121 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 GGCTO75223 188 aaKnown RBP22.17■■□□□ 1.14
VEGFA-211ENST00000476772 SRP19P09132 144 aaKnown RBP22.17■■□□□ 1.14
VEGFA-211ENST00000476772 GP9P14770 177 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 ADCYAP1P18509 176 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 TCTEX1D4Q5JR98 221 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 NDUFA7O95182 113 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 LGALS1P09382 135 aaKnown RBP22.17■■□□□ 1.14
VEGFA-211ENST00000476772 CD81P60033 236 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 SRSF2Q01130 221 aaKnown RBP22.17■■□□□ 1.14
VEGFA-211ENST00000476772 CST9LP1Q5W188 147 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 SLC35B3Q9H1N7 401 aa22.17■■□□□ 1.14
VEGFA-211ENST00000476772 NDUFA4O00483 81 aa22.16■■□□□ 1.14
VEGFA-211ENST00000476772 SNRPCP09234 159 aaKnown RBP22.16■■□□□ 1.14
VEGFA-211ENST00000476772 ATP5G3P48201 142 aa22.16■■□□□ 1.14
VEGFA-211ENST00000476772 C20orf24Q9BUV8 137 aa22.16■■□□□ 1.14
VEGFA-211ENST00000476772 FAM74A7A6NL05 159 aa22.15■■□□□ 1.14
VEGFA-211ENST00000476772 UNQ9165/PRO28630Q6UXU0 137 aa22.15■■□□□ 1.14
VEGFA-211ENST00000476772 C11orf94C9JXX5 98 aa22.14■■□□□ 1.14
VEGFA-211ENST00000476772 ZNF207O43670 478 aaKnown RBP22.14■■□□□ 1.14
VEGFA-211ENST00000476772 TMEM14CQ9P0S9 112 aa22.14■■□□□ 1.14
VEGFA-211ENST00000476772 F8W036 122 aa22.14■■□□□ 1.13
VEGFA-211ENST00000476772 CYB561D1Q8N8Q1 229 aa22.14■■□□□ 1.13
VEGFA-211ENST00000476772 OR4F5Q8NH21 305 aa22.14■■□□□ 1.13
VEGFA-211ENST00000476772 OR4F4Q96R69 305 aa22.14■■□□□ 1.13
VEGFA-211ENST00000476772 NF1P21359 2839 aa22.13■■□□□ 1.13
VEGFA-211ENST00000476772 C18orf65Q6ZTR6 163 aa22.13■■□□□ 1.13
VEGFA-211ENST00000476772 BPIFA4PQ86YQ2 179 aa22.13■■□□□ 1.13
VEGFA-211ENST00000476772 METTL26Q96S19 204 aa22.13■■□□□ 1.13
VEGFA-211ENST00000476772 ARL2-SNX15V9GYD0 113 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms