RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-208	ENST00000471226	GGTLC1	Q9BX51	225 aa		11.24	□□□□□ -0.61
ABCF3-208	ENST00000471226	IGSF23	A1L1A6	192 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	CST7	O76096	145 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	SULT1A1	P50225	295 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	SELENOT	P62341	195 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	SLC38A11	Q08AI6	406 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	ZNF124	Q15973	351 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	C1orf194	Q5T5A4	169 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	TEPP	Q6URK8	271 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	SIGLEC15	Q6ZMC9	328 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226	WWC2-AS2	Q96NR7	200 aa		11.23	□□□□□ -0.61
ABCF3-208	ENST00000471226		H0YIZ8	118 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226	RLN2	P04090	185 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226	DEFB131A	P59861	70 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226	PLP1	P60201	277 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226	NRN1	Q9NPD7	142 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226	ALG5	Q9Y673	324 aa		11.22	□□□□□ -0.61
ABCF3-208	ENST00000471226		E5RGE8	158 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	ORM2	P19652	201 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	S100A11	P31949	105 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	VWC2	Q2TAL6	325 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	TMEM217	Q8N7C4	229 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	PPP1R1C	Q8WVI7	109 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	SEPSECS	Q9HD40	501 aa	Known RBP	11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	OR5AC2	Q9NZP5	309 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	FBXL17	Q9UF56	701 aa		11.21	□□□□□ -0.61
ABCF3-208	ENST00000471226	KIR2DL5B	A0A0G2JN68	375 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	KIR2DL5B	A0A0G2JPC4	375 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	ZNF98	A6NK75	572 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	AGPAT2	O15120	278 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	LINC00869	P0C866	280 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	LRRC37A5P	Q49AS3	106 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	STX12	Q86Y82	276 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	KIR2DL5A	Q8N109	375 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	OR1B1	Q8NGR6	318 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	KIR2DL5B	Q8NHK3	375 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	PPP1R14B	Q96C90	147 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	MGST2	Q99735	147 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	RNF126	Q9BV68	326 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	RETN	Q9HD89	108 aa		11.2	□□□□□ -0.62
ABCF3-208	ENST00000471226	ZNF688	P0C7X2	276 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	S100A7	P31151	101 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	APOC4	P55056	127 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	HBG1	P69891	147 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	HBG2	P69892	147 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	ATP6V1F	Q16864	119 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	LEMD1	Q68G75	181 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	ZNF546	Q86UE3	836 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	OR8I2	Q8N0Y5	310 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	TMEM147	Q9BVK8	224 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	UQCC1	Q9NVA1	299 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226	WDR83OS	Q9Y284	106 aa		11.19	□□□□□ -0.62
ABCF3-208	ENST00000471226		H3BRN7	92 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	UBE2C	O00762	179 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	HYPM	O75409	117 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	MPC2	O95563	127 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	RPL35A	P18077	110 aa	Known RBP	11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	CXCL3	P19876	107 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	RAP2B	P61225	183 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	NHLH2	Q02577	135 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	PXDC1	Q5TGL8	231 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	PATE2	Q6UY27	113 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	SLC25A31	Q9H0C2	315 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	SLC25A32	Q9H2D1	315 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	DOK5	Q9P104	306 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	HIGD1A	Q9Y241	93 aa		11.18	□□□□□ -0.62
ABCF3-208	ENST00000471226	SOCS3	O14543	225 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	CAMLG	P49069	296 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	RGS21	Q2M5E4	152 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226		Q6ZWC4	215 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	CHAC2	Q8WUX2	184 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	C17orf77	Q96MU5	243 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	GPR82	Q96P67	336 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	OVOL2	Q9BRP0	275 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	SHANK2-AS3	Q9BTD1	123 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	SCRT1	Q9BWW7	348 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	ARL6	Q9H0F7	186 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	SLC25A22	Q9H936	323 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	EDA2R	Q9HAV5	297 aa		11.17	□□□□□ -0.62
ABCF3-208	ENST00000471226	OR5G3	P0C626	314 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	GALR1	P47211	349 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	SNRPD3	P62318	126 aa	Known RBP	11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	PRR20E	P86478	221 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	PRR20C	P86479	221 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	PRR20D	P86480	221 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	PRR20B	P86481	221 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	PRR20A	P86496	221 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	BAX	Q07812	192 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	RAB31	Q13636	194 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	OR5C1	Q8NGR4	320 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	CSTL1	Q9H114	145 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	ARV1	Q9H2C2	271 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	TP53TG1	Q9Y2A0	90 aa		11.16	□□□□□ -0.62
ABCF3-208	ENST00000471226	UBE2L5P	A0A1B0GUS4	154 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	PET100	P0DJ07	73 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	LYL1	P12980	280 aa		11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	RPL29	P47914	159 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-208	ENST00000471226	OPCML	Q14982	345 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 92 ms