RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 Q5BKY6 102 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 C16orf54Q6UWD8 224 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 ZNF546Q86UE3 836 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 MGST2Q99735 147 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 SLC45A2Q9UMX9 530 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 HSPB11Q9Y547 144 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 SORL1Q92673 2214 aa8.96□□□□□ -0.98
VPS13D-204ENST00000469054 IGKV3-7A0A075B6H7 116 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 UBE2L5PA0A1B0GUS4 154 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 CD7P09564 240 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 LINC00869P0C866 280 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 CAMLGP49069 296 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 AP2S1P53680 142 aaPredicted RBP8.95□□□□□ -0.98
VPS13D-204ENST00000469054 CD81P60033 236 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 RPL11P62913 178 aaKnown RBP8.95□□□□□ -0.98
VPS13D-204ENST00000469054 Q6ZNX1 250 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 STPG3Q8N7X2 389 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 OR1B1Q8NGR6 318 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 OR2T35Q8NGX2 323 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 CHAC2Q8WUX2 184 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 GLMPQ8WWB7 406 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 PPP1R14BQ96C90 147 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 NEURL2Q9BR09 285 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 SMAD5-AS1Q9Y6J3 95 aa8.95□□□□□ -0.98
VPS13D-204ENST00000469054 HELTA6NFD8 242 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 OR4C46A6NHA9 309 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 MPDU1O75352 247 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 HYPMO75409 117 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 FGF7P21781 194 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 S100A7P31151 101 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 ATP5SQ99766 215 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 GGTLC1Q9BX51 225 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 DOK5Q9P104 306 aa8.94□□□□□ -0.98
VPS13D-204ENST00000469054 ZNF98A6NK75 572 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 DNASE2O00115 360 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-204ENST00000469054 OR5G3P0C626 314 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 RPL29P47914 159 aaKnown RBP8.93□□□□□ -0.98
VPS13D-204ENST00000469054 TFPI2P48307 235 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 OPCMLQ14982 345 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 PXDC1Q5TGL8 231 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 MIC13Q5XKP0 118 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 SIGLEC15Q6ZMC9 328 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 Q6ZRG5 221 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 WFDC3Q8IUB2 231 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 GBGT1Q8N5D6 347 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 AQP10Q96PS8 301 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 NPCDR1Q9BY65 106 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 SLC25A39Q9BZJ4 359 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-204ENST00000469054 SMIM3Q9BZL3 60 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 WDR61Q9GZS3 305 aaKnown RBP8.93□□□□□ -0.98
VPS13D-204ENST00000469054 ARL6Q9H0F7 186 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 MS4A6AQ9H2W1 248 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 C19orf73Q9NVV2 129 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 HIGD1AQ9Y241 93 aa8.93□□□□□ -0.98
VPS13D-204ENST00000469054 TRAV2A0A0B4J234 112 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 A8MZ25 164 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 OR11H12B2RN74 326 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 G3V3Q6 166 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 B2MP61769 119 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 PATE2Q6UY27 113 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 S100A7AQ86SG5 101 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 OR8I2Q8N0Y5 310 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 INO80EQ8NBZ0 244 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-204ENST00000469054 STXBP6Q8NFX7 210 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 SHANK2-AS3Q9BTD1 123 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 ARV1Q9H2C2 271 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 PXMP4Q9Y6I8 212 aa8.92□□□□□ -0.98
VPS13D-204ENST00000469054 ELOA3CA0A087WX78 387 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-204ENST00000469054 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 H3BRN7 92 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 IFNA5P01569 189 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 CMC4P56277 68 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-204ENST00000469054 DEFB125Q8N687 156 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 DCANP1Q8TF63 244 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 TMEM37Q8WXS4 190 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 WFDC10AQ9H1F0 79 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 TUBA4BQ9H853 241 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 SLC25A22Q9H936 323 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 WFDC1Q9HC57 220 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 DNAJC4Q9NNZ3 241 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 SLC39A9Q9NUM3 307 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 FBXL17Q9UF56 701 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
VPS13D-204ENST00000469054 PRKDCP78527 4128 aaKnown RBP8.9□□□□□ -0.98
VPS13D-204ENST00000469054 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 SMLR1H3BR10 107 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 K7EQG2 157 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 COX7A2P2O60397 106 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 ODF3L2Q3SX64 289 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 ZNF709Q8N972 641 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 OR1L4Q8NGR5 311 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 SCGB1C1Q8TD33 95 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 UHRF2Q96PU4 802 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
VPS13D-204ENST00000469054 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms