RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 LINC00301Q8NCQ3 95 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 PPTC7Q8NI37 304 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 ZNF418Q8TF45 676 aaPredicted RBP1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 SFT2D1Q8WV19 159 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 DYDC1Q8WWB3 177 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 PLEKHB2Q96CS7 222 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 GPX7Q96SL4 187 aaPredicted RBP1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 MED11Q9P086 117 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 UHRF1BP1Q6BDS2 1440 aa1.4□□□□□ -2.18
PRPF40A-205ENST00000467114 RIMBP3CA6NJZ7 1639 aa1.4□□□□□ -2.18
PRPF40A-205ENST00000467114 RIMBP3BA6NNM3 1639 aa1.4□□□□□ -2.18
PRPF40A-205ENST00000467114 RIMBP3Q9UFD9 1639 aa1.4□□□□□ -2.18
PRPF40A-205ENST00000467114 CR1P17927 2039 aa1.4□□□□□ -2.18
PRPF40A-205ENST00000467114 OBSL1O75147 1896 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 A0A1B0GV72 72 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 MAP1LC3B2A6NCE7 125 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 A8MWV9 139 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 TRGC2P03986 189 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 CRHP06850 196 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 HLA-EP13747 358 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 PDE6HQ13956 83 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 CDK5R1Q15078 307 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 LTC4SQ16873 150 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 C10orf55Q5SWW7 151 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 Q8IYB0 196 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 Q8N2B8 174 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 C12orf29Q8N999 325 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 C15orf53Q8NAA6 179 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 TEX47Q8TBZ9 253 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 REG4Q9BYZ8 158 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 MAP1LC3BQ9GZQ8 125 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 POPDC3Q9HBV1 291 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 BRWD1Q9NSI6 2320 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 MYH7BA7E2Y1 1941 aa1.4□□□□□ -2.19
PRPF40A-205ENST00000467114 STRCQ7RTU9 1775 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 SYNMO15061 1565 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 MED12LQ86YW9 2145 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 MRPS14O60783 128 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 LYZL6O75951 148 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 IFNA21P01568 189 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 TMBIM6P55061 237 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 RAB4BP61018 213 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 DEFB113Q30KQ7 82 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 SMIM15Q7Z3B0 74 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 OR2T35Q8NGX2 323 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 OR10K1Q8NGX5 313 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 LINC00467Q9BRT7 94 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 C14orf132Q9NPU4 83 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 SMPXQ9UHP9 88 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 ARHGEF28Q8N1W1 1705 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 SCN8AQ9UQD0 1980 aa1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 YTHDC2Q9H6S0 1430 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-205ENST00000467114 DOCK4Q8N1I0 1966 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 TLCD2A6NGC4 264 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 H0YJX3 145 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 CXCL1P09341 107 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 RNASE3P12724 160 aaKnown RBP1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 DR1Q01658 176 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 SURF2Q15527 256 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 FKBP1CQ5VVH2 108 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 CROCCP2Q86T23 111 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 ZNF714Q96N38 554 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 MRPL40Q9NQ50 206 aaKnown RBP1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 MED9Q9NWA0 146 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 LAMTOR3Q9UHA4 124 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 OR52A1Q9UKL2 312 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 ANAPC1Q9H1A4 1944 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 MYH2Q9UKX2 1941 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 HEATR5BQ9P2D3 2071 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 SDK1Q7Z5N4 2213 aa1.38□□□□□ -2.19
PRPF40A-205ENST00000467114 DENND4CQ5VZ89 1909 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 ODAMA1E959 279 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 PFDN1O60925 122 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 ARPP19P56211 112 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 TFAMQ00059 246 aaKnown RBP1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 MSMO1Q15800 293 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 RTL8BQ17RB0 113 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 C1orf140Q5VVS0 124 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 CLECL1Q8IZS7 167 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 OR4K15Q8NH41 348 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 RTL8AQ9BWD3 113 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 CYSTM1Q9H1C7 97 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 LY96Q9Y6Y9 160 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 SBF1O95248 1867 aa1.37□□□□□ -2.19
PRPF40A-205ENST00000467114 MYH3P11055 1940 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 TAF1LQ8IZX4 1826 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 A0A1W2PRE2 83 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 DHFRP00374 187 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 PLCXD2Q0VAA5 305 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 UNQ6190/PRO20217Q6UXQ8 127 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 DEFB119Q8N690 84 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 OR4C6Q8NH72 309 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 CARD19Q96LW7 228 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 CCDC32Q9BV29 185 aa1.36□□□□□ -2.19
PRPF40A-205ENST00000467114 MYOFQ9NZM1 2061 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms