RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 STPG3Q8N7X2 389 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 CD300EQ496F6 205 aaPredicted RBP12.08□□□□□ -0.48
GPC1-207ENST00000466624 Q6ZRG5 221 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 SCGB1C1Q8TD33 95 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 ST8SIA2Q92186 375 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 SORL1Q92673 2214 aa12.08□□□□□ -0.48
GPC1-207ENST00000466624 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
GPC1-207ENST00000466624 A0A0D9SG52 128 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 BUB3O43684 328 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 HYPMO75409 117 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 APOHP02749 345 aaPredicted RBP12.07□□□□□ -0.48
GPC1-207ENST00000466624 ORM2P19652 201 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 B2MP61769 119 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 MIC13Q5XKP0 118 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 OR1B1Q8NGR6 318 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 SLC39A9Q9NUM3 307 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
GPC1-207ENST00000466624 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 IGHV3-49A0A0A0MS15 119 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 C16orf54Q6UWD8 224 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 OR1L4Q8NGR5 311 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 PFDN5Q99471 154 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 RNF2Q99496 336 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 RNF24Q9Y225 148 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
GPC1-207ENST00000466624 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 H3BRN7 92 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 TSPAN4O14817 238 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 JTBO76095 146 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
GPC1-207ENST00000466624 GLMPQ8WWB7 406 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 DOK5Q9P104 306 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
GPC1-207ENST00000466624 DNAH3Q8TD57 4116 aa12.05□□□□□ -0.48
GPC1-207ENST00000466624 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 HELTA6NFD8 242 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 OR5G3P0C626 314 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 CXCL2P19875 107 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 KRTAP10-11P60412 298 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 RPL7L1Q6DKI1 246 aaKnown RBP12.04□□□□□ -0.48
GPC1-207ENST00000466624 TCF24Q7RTU0 167 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 TMEM37Q8WXS4 190 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 PPP1R14BQ96C90 147 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
GPC1-207ENST00000466624 ARPC5LQ9BPX5 153 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
GPC1-207ENST00000466624 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 RSG1Q9BU20 258 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 SLC25A39Q9BZJ4 359 aaPredicted RBP12.04□□□□□ -0.48
GPC1-207ENST00000466624 DNAJC4Q9NNZ3 241 aa12.04□□□□□ -0.48
GPC1-207ENST00000466624 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 CD300CQ08708 224 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 OR2G3Q8NGZ4 309 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 GPR82Q96P67 336 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
GPC1-207ENST00000466624 TRAV2A0A0B4J234 112 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 BCL2L11O43521 198 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 GP9P14770 177 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 ZFP69Q49AA0 526 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 SIGLEC15Q6ZMC9 328 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 GNPNAT1Q96EK6 184 aaPredicted RBP12.02□□□□□ -0.49
GPC1-207ENST00000466624 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
GPC1-207ENST00000466624 KANTRA0A1W2PQU2 76 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 PAFAH1B2P68402 229 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 SERF2P84101 59 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
GPC1-207ENST00000466624 TMUB2Q71RG4 321 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 SCRT1Q9BWW7 348 aa12.01□□□□□ -0.49
GPC1-207ENST00000466624 OR4C46A6NHA9 309 aa12□□□□□ -0.49
GPC1-207ENST00000466624 PFDN1O60925 122 aa12□□□□□ -0.49
GPC1-207ENST00000466624 RPL7P18124 248 aaKnown RBP12□□□□□ -0.49
GPC1-207ENST00000466624 GUCA2BQ16661 112 aa12□□□□□ -0.49
GPC1-207ENST00000466624 FFAR4Q5NUL3 377 aa12□□□□□ -0.49
GPC1-207ENST00000466624 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms