RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
HMGXB4-204ENST00000455359 Q6ZRG5 221 aa10.82□□□□□ -0.68
HMGXB4-204ENST00000455359 ZNF709Q8N972 641 aa10.82□□□□□ -0.68
HMGXB4-204ENST00000455359 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
HMGXB4-204ENST00000455359 MLXQ9UH92 298 aa10.82□□□□□ -0.68
HMGXB4-204ENST00000455359 CMYA5Q8N3K9 4069 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 HELTA6NFD8 242 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 SMLR1H3BR10 107 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 BUB3O43684 328 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 STPG3Q8N7X2 389 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 SMIM3Q9BZL3 60 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 SLC39A9Q9NUM3 307 aa10.81□□□□□ -0.68
HMGXB4-204ENST00000455359 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 A0A0D9SG52 128 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 TSPAN4O14817 238 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 C1QBP02746 253 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 ORM2P19652 201 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 GATA2P23769 480 aaPredicted RBP10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 B2MP61769 119 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 RBPMS2Q6ZRY4 209 aaKnown RBP10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 OR11H4Q8NGC9 324 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 OR1L4Q8NGR5 311 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 ST8SIA2Q92186 375 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 RNF2Q99496 336 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 SPAG8Q99932 426 aaPredicted RBP10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 WFDC1Q9HC57 220 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 ZNF256Q9Y2P7 627 aaPredicted RBP10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 TIMM9Q9Y5J7 89 aa10.8□□□□□ -0.68
HMGXB4-204ENST00000455359 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 EDN2P20800 178 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 C16orf54Q6UWD8 224 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 TMEM61Q8N0U2 210 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 KCNRGQ8N5I3 272 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 HYLS1Q96M11 299 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 GPR82Q96P67 336 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 PFDN5Q99471 154 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 ARL6Q9H0F7 186 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 DNAJC4Q9NNZ3 241 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
HMGXB4-204ENST00000455359 IGHV3-49A0A0A0MS15 119 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 TRAV2A0A0B4J234 112 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 COX7A2P2O60397 106 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 JTBO76095 146 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 OR5G3P0C626 314 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 MIC13Q5XKP0 118 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 GATAD1Q8WUU5 269 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 ARV1Q9H2C2 271 aa10.78□□□□□ -0.68
HMGXB4-204ENST00000455359 FBN3Q75N90 2809 aa10.77□□□□□ -0.68
HMGXB4-204ENST00000455359 IGHV3OR16-13A0A075B7E8 117 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 IGHV3-74A0A0B4J1X5 117 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 GP9P14770 177 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 KRTAP10-11P60412 298 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 GNPNAT1Q96EK6 184 aaPredicted RBP10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 PSMG3Q9BT73 122 aaPredicted RBP10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 SLC25A39Q9BZJ4 359 aaPredicted RBP10.77□□□□□ -0.69
HMGXB4-204ENST00000455359 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 H3BRN7 92 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 CMC4P56277 68 aaPredicted RBP10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 OR8I2Q8N0Y5 310 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 OR2G3Q8NGZ4 309 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 TMEM37Q8WXS4 190 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 ARPC5LQ9BPX5 153 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 DOK5Q9P104 306 aa10.76□□□□□ -0.69
HMGXB4-204ENST00000455359 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 KANTRA0A1W2PQU2 76 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 RPL7P18124 248 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 GALR1P47211 349 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 MEOX2P50222 304 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 EIF5AP63241 154 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 SERF2P84101 59 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 GUCA2BQ16661 112 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 RPL7L1Q6DKI1 246 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 LINC00305Q7Z4B0 112 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
HMGXB4-204ENST00000455359 SORL1Q92673 2214 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 BCL2L11O43521 198 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 MBP02144 154 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 CXCL2P19875 107 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 ZFP69Q49AA0 526 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 SIGLEC15Q6ZMC9 328 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 GTSCR1Q86UQ5 136 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 RSG1Q9BU20 258 aa10.74□□□□□ -0.69
HMGXB4-204ENST00000455359 CYTL1Q9NRR1 136 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms