RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 CENPXA8MT69 81 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 SSSCA1O60232 199 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 IFNA21P01568 189 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 MIFP14174 115 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 NKX2-1P43699 371 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 AKR1C1Q04828 323 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
NCKIPSD-208ENST00000454134 ELOA3CA0A087WX78 387 aaPredicted RBP11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 SOCS3O14543 225 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 ORM2P19652 201 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 FXYD7P58549 80 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 C7orf50Q9BRJ6 194 aaKnown RBP11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
NCKIPSD-208ENST00000454134 EPPK1P58107 5090 aaKnown RBP11.9□□□□□ -0.51
NCKIPSD-208ENST00000454134 SMCO3A2RU48 225 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 PLA2G10O15496 165 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 CCNKO75909 580 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 ID1P41134 155 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 PSMB3P49720 205 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 NUTF2P61970 127 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 SLC25A32Q9H2D1 315 aa11.89□□□□□ -0.51
NCKIPSD-208ENST00000454134 ZNF98A6NK75 572 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 PMS2P5A8MQ11 134 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 F6UB75 175 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 CFDP00746 253 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 PAX9P55771 341 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 IAH1Q2TAA2 248 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 C2CD4CQ8TF44 421 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 HRH4Q9H3N8 390 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 SAV1Q9H4B6 383 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 GSKIPQ9P0R6 139 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 DOK5Q9P104 306 aa11.88□□□□□ -0.51
NCKIPSD-208ENST00000454134 DEDDO75618 318 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 RRAS2P62070 204 aaPredicted RBP11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 CYP2G1PQ6ZSU1 146 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 TMEM144Q7Z5S9 345 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 OR4B1Q8NGF8 309 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 MITD1Q8WV92 249 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 TMEM147Q9BVK8 224 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 SCRT1Q9BWW7 348 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 C20orf85Q9H1P6 137 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
NCKIPSD-208ENST00000454134 IGLL5B9A064 214 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 ISLRO14498 428 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 IL5P05113 134 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 GALR1P47211 349 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 Q6ZTC4 211 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 ZNF767PQ75MW2 155 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 ZBTB8BQ8NAP8 495 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 C16orf92Q96LL3 132 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 C17orf77Q96MU5 243 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 SLC45A2Q9UMX9 530 aa11.86□□□□□ -0.51
NCKIPSD-208ENST00000454134 TRAV6A0A075B6T7 132 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 IGHV3OR16-12A0A075B7B8 117 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 CCSO14618 274 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 LYRM1O43325 122 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 LGALS9CQ6DKI2 356 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 TMEM14EPQ6UXP3 125 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 SLC35B3Q9H1N7 401 aa11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 RCL1Q9Y2P8 373 aaKnown RBP11.85□□□□□ -0.51
NCKIPSD-208ENST00000454134 C11orf94C9JXX5 98 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 MBPP02686 304 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 MEOX2P50222 304 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 DLK1P80370 383 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 CNPY1Q3B7I2 92 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 EBLN2Q6P2I7 272 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 ZNF709Q8N972 641 aa11.84□□□□□ -0.51
NCKIPSD-208ENST00000454134 A0A0J9YX75 114 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 H3BRN7 92 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 TCRBP04435 133 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 LINC00869P0C866 280 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 ARL16Q0P5N6 197 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 ZNF705AQ6ZN79 300 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 OR10P1Q8NGE3 313 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 UHRF2Q96PU4 802 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 SEC22CQ9BRL7 303 aa11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-208ENST00000454134 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms