RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PPP1R14BQ96C90 147 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
PRPF40A-203ENST00000448428 K7EPK0 472 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 GIG44P09565 113 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 ORM2P19652 201 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 IL15RAQ13261 267 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 GSG1LQ6UXU4 331 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 CYP2G1PQ6ZSU1 146 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 ENKURQ8TC29 256 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 GATAD1Q8WUU5 269 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 C11orf1Q9H5F2 150 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 FBXL17Q9UF56 701 aa9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 LSM5Q9Y4Y9 91 aaKnown RBP9.32□□□□□ -0.92
PRPF40A-203ENST00000448428 ZNF98A6NK75 572 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 L7N2F9 121 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 VAMP2P63027 116 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 RARRES2Q99969 163 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 SLC45A2Q9UMX9 530 aa9.31□□□□□ -0.92
PRPF40A-203ENST00000448428 SOCS3O14543 225 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 DEDDO75618 318 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 MORN3Q6PF18 240 aaPredicted RBP9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 TEPPQ6URK8 271 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 C17orf77Q96MU5 243 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 TMEM147Q9BVK8 224 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 GGACTQ9BVM4 153 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 SLC25A32Q9H2D1 315 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 SLC25A22Q9H936 323 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 DOK5Q9P104 306 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
PRPF40A-203ENST00000448428 DNAH7Q8WXX0 4024 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 H3BMM0 161 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 SPP1P10451 314 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 C4BPBP20851 252 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 ID1P41134 155 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 BCAP31P51572 246 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 DEFB1P60022 68 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 PLP1P60201 277 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 SELENOTP62341 195 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 RSG1Q9BU20 258 aa9.29□□□□□ -0.92
PRPF40A-203ENST00000448428 INMT-MINDY4F8WBC2 141 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 HYPMO75409 117 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 CST7O76096 145 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 LINC00869P0C866 280 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 PVALBP20472 110 aaPredicted RBP9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 GALR1P47211 349 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 PSMB3P49720 205 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 CAV2P51636 162 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 S100A10P60903 97 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 SLC38A11Q08AI6 406 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 RAB32Q13637 225 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 GDF5OSQ5U4N7 250 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 MARVELD1Q9BSK0 173 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 SHANK2-AS3Q9BTD1 123 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 SCRT1Q9BWW7 348 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 SLC25A39Q9BZJ4 359 aaPredicted RBP9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
PRPF40A-203ENST00000448428 LCE6AA0A183 80 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 H3BRN7 92 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 ISLRO14498 428 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 GOSR2O14653 212 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 AGPAT2O15120 278 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 SIX6O95475 246 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 OR5G3P0C626 314 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 HLA-DRB4P13762 266 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 ATF4P18848 351 aaPredicted RBP9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 S100A7P31151 101 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 RAP2BP61225 183 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 TMEM217Q8N7C4 229 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 GPR82Q96P67 336 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 UHRF2Q96PU4 802 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 MGST2Q99735 147 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 ARL6Q9H0F7 186 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 CLEC5AQ9NY25 188 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 HLA-DRB4X5D2U9 266 aa9.27□□□□□ -0.93
PRPF40A-203ENST00000448428 TENM2Q9NT68 2774 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 IGSF23A1L1A6 192 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 DEFB4AO15263 64 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 PRAF2O60831 178 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 MEOX2P50222 304 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 DEFA1P59665 94 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 DEFA3P59666 94 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 PMS2P11Q13670 270 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
PRPF40A-203ENST00000448428 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms