RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 ODAMA1E959 279 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 TMEM213A2RRL7 107 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 IQCF5A8MTL0 148 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 GOLGA8KD6RF30 607 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 GPR31O00270 319 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 PFDN6O15212 129 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 ERC2-IT1O76042 136 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 FAM236CP0DP71 79 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 CXCL8P10145 99 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 IFITM1P13164 125 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 SPRR2DP22532 72 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 S100A4P26447 101 aaKnown RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 SERPINB9P50453 376 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 TCL1AP56279 114 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 SNRPD2P62316 118 aaKnown RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 EIF3IQ13347 325 aaKnown RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 ZNF56Q15929 161 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 BATFQ16520 125 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 CLVS2Q5SYC1 327 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 GLYATL3Q5SZD4 288 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 CLEC6AQ6EIG7 209 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 C2orf82Q6UX34 121 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 TMEM14EPQ6UXP3 125 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 C4orf22Q6V702 233 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 VMO1Q7Z5L0 202 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 ANKRD29Q8N6D5 301 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 OR10K1Q8NGX5 313 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 OR2T10Q8NGZ9 312 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 FAM213BQ8TBF2 198 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 RAB37Q96AX2 223 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 PLEKHB2Q96CS7 222 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 RMND5BQ96G75 393 aaPredicted RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 DCUN1D5Q9BTE7 237 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 CCDC94Q9BW85 323 aaPredicted RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 IMP3Q9NV31 184 aaKnown RBP-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 PLEKHJ1Q9NW61 149 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 C3orf18Q9UK00 162 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 AHCTF1Q8WYP5 2266 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 MYH10P35580 1976 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 RAD50Q92878 1312 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 CTTNBP2Q8WZ74 1663 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 COL24A1Q17RW2 1714 aa-0.47□□□□□ -2.49
SNHG3-203ENST00000447507 NEO1Q92859 1461 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 TEP1Q99973 2627 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 PTPRDP23468 1912 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 F8P00451 2351 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 LRP1BQ9NZR2 4599 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 C9orf170A2RU37 121 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 C7orf71A4D174 169 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 E7EUB6 86 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 CRYZL1O95825 349 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 IFNA10P01566 189 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 SERPINE1P05121 402 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 HIST1H1TP22492 207 aaPredicted RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 PPIBP23284 216 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 PSMB6P28072 239 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 DSCR4P56555 118 aaPredicted RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 RHOBP62745 196 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 ANGPT1Q15389 498 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 TRAPPC6BQ86SZ2 158 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 PDZD9Q8IXQ8 264 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 RAB8BQ92930 207 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 POP5Q969H6 163 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 SLC35B4Q969S0 331 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 MALSU1Q96EH3 234 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 LINC00208Q96KT6 92 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 C7orf50Q9BRJ6 194 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 NHP2Q9NX24 153 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 TMEM56-RWDD3S4R434 201 aa-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 MYO5AQ9Y4I1 1855 aaKnown RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 KDM6AO15550 1401 aaPredicted RBP-0.48□□□□□ -2.49
SNHG3-203ENST00000447507 UBR4Q5T4S7 5183 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 TRAV26-2A0A0B4J265 109 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 H0Y980 276 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 M0QZ92 97 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 FXYD1O00168 92 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 SSNA1O43805 119 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 PRM1P04553 51 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 S100A9P06702 114 aaKnown RBP-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 SMIM17P0DL12 118 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 C8orf88P0DMB2 117 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 SMIM10L2AP0DMW4 78 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 SMIM10L2BP0DMW5 78 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 CD79AP11912 226 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 UCHL3P15374 230 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 HADHBP55084 474 aaKnown RBP-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 RAB5BP61020 215 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 YPEL3P61236 119 aaPredicted RBP-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 CDK6Q00534 326 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 HIST2H3PS2Q5TEC6 136 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 LRRN1Q6UXK5 716 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 SYCE1Q8N0S2 351 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 OR5AS1Q8N127 324 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 CNPY4Q8N129 248 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 C12orf45Q8N5I9 185 aaPredicted RBP-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 GDPD1Q8N9F7 314 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 PIGXQ8TBF5 258 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 PBOV1Q9GZY1 135 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 TMEM126AQ9H061 195 aa-0.49□□□□□ -2.49
SNHG3-203ENST00000447507 LPAR5Q9H1C0 372 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms