RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SPCS2Q15005 226 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 PYDC2Q56P42 97 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 EBLN2Q6P2I7 272 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 COQ8AQ8NI60 647 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 LHFPL5Q8TAF8 219 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 RNF125Q96EQ8 232 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 FAM210BQ96KR6 192 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 GPR82Q96P67 336 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 NEU1Q99519 415 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 RNF126Q9BV68 326 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 RBKSQ9H477 322 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.67□□□□□ -1.5
CD44-211ENST00000442151 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 CENPXA8MT69 81 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 IGLL5B9A064 214 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 IFNA21P01568 189 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 AMBPP02760 352 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 GALR1P47211 349 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 PSMB3P49720 205 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 LYZL2Q7Z4W2 148 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 LRTM2Q8N967 370 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 TRGV9Q99603 122 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 PBDC1Q9BVG4 233 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 GOLT1BQ9Y3E0 138 aa5.66□□□□□ -1.5
CD44-211ENST00000442151 IGHV4-28A0A0C4DH34 117 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 NAP1L6A6NFF2 107 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 CCDC160A6NGH7 325 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 H3BMM0 161 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 HLA-DRB4P13762 266 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 HLA-DMBP28068 263 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 B2MP61769 119 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 EWSR1Q01844 656 aaKnown RBP eCLIP5.65□□□□□ -1.5
CD44-211ENST00000442151 FAAP20Q6NZ36 180 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 FOXI2Q6ZQN5 318 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 TMED4Q7Z7H5 227 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 OR8I2Q8N0Y5 310 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 Q8NAQ8 132 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 BPIFCQ8NFQ6 507 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 SOSTQ9BQB4 213 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 RPRMQ9NS64 109 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 MRPL36Q9P0J6 103 aaKnown RBP5.65□□□□□ -1.5
CD44-211ENST00000442151 PAIP2BQ9ULR5 123 aaKnown RBP5.65□□□□□ -1.5
CD44-211ENST00000442151 HLA-DRB4X5D2U9 266 aa5.65□□□□□ -1.5
CD44-211ENST00000442151 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.51
CD44-211ENST00000442151 WRBO00258 174 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 ISLRO14498 428 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 SFT2D2O95562 160 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 P0DMU3 169 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 FAM231AP0DMU4 169 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 FAM231CP0DMU5 169 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 GAMTQ14353 236 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 USF2Q15853 346 aaPredicted RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 SPANXN2Q5MJ10 180 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 FAM24BQ8N5W8 94 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 OR4D5Q8NGN0 318 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 OR1B1Q8NGR6 318 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 LINC00052Q96N35 136 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 TMEM147Q9BVK8 224 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 SLIRPQ9GZT3 109 aaKnown RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 RFNGQ9Y644 331 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 SYNGR2O43760 224 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 LYZP61626 148 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 C7orf50Q9BRJ6 194 aaKnown RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 NDUFAF3Q9BU61 184 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 SAV1Q9H4B6 383 aaPredicted RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 APLNQ9ULZ1 77 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 STRAPQ9Y3F4 350 aaKnown RBP5.64□□□□□ -1.51
CD44-211ENST00000442151 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
CD44-211ENST00000442151 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 DEFB131BA0A096LNP1 70 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 H3BMQ9 156 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 PITX3O75364 302 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 NXPH3O95157 252 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 HBE1P02100 147 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
CD44-211ENST00000442151 RBMY1CP0DJD4 496 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 RAP2BP61225 183 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 SELENOTP62341 195 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 PSG9Q00887 426 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 RBMY1FQ15415 496 aaKnown RBP5.63□□□□□ -1.51
CD44-211ENST00000442151 LINC00336Q6ZUF6 198 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 THAP8Q8NA92 274 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
CD44-211ENST00000442151 ZNF701M0R085 212 aaPredicted RBP5.62□□□□□ -1.51
CD44-211ENST00000442151 DEFB4AO15263 64 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 GIG44P09565 113 aaPredicted RBP5.62□□□□□ -1.51
CD44-211ENST00000442151 OXA1LQ15070 435 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 TRIQKQ629K1 86 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 CSNK1G2-AS1Q8NCQ2 148 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 OR4B1Q8NGF8 309 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 TMEM170AQ8WVE7 144 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 MAGT1Q9H0U3 335 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 X6R8D5 127 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 IGHV4-4A0A075B6R2 117 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 FNDC10F2Z333 226 aa5.62□□□□□ -1.51
CD44-211ENST00000442151 RPL7P18124 248 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms