RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CIDEAO60543 219 aa9.81□□□□□ -0.84
NEK1-201ENST00000439128 HOXA5P20719 270 aa9.81□□□□□ -0.84
NEK1-201ENST00000439128 TCTEX1D4Q5JR98 221 aa9.81□□□□□ -0.84
NEK1-201ENST00000439128 HSPB9Q9BQS6 159 aa9.81□□□□□ -0.84
NEK1-201ENST00000439128 VPS25Q9BRG1 176 aa9.81□□□□□ -0.84
NEK1-201ENST00000439128 SEPSECSQ9HD40 501 aaKnown RBP9.81□□□□□ -0.84
NEK1-201ENST00000439128 ZNF562Q6V9R5 426 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 FOXL2NBQ6ZUU3 175 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 DNAL4O96015 105 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 LMO1P25800 156 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 JKAMPQ9P055 326 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 LOXP28300 417 aaPredicted RBP9.8□□□□□ -0.84
NEK1-201ENST00000439128 Q6AWC8 147 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 IGFL2Q6UWQ7 119 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 IGHV4-39P01824 125 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
NEK1-201ENST00000439128 ZNF98A6NK75 572 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 LINC00473A8K010 186 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 APOHP02749 345 aaPredicted RBP9.8□□□□□ -0.84
NEK1-201ENST00000439128 EXOC3-AS1Q8N2X6 119 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 ST6GALNAC6Q969X2 333 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 C12orf57Q99622 126 aa9.8□□□□□ -0.84
NEK1-201ENST00000439128 USF3Q68DE3 2245 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 CKS1BP61024 79 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 IGKV1-16P04430 117 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 PRO3102Q9H379 93 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 MED12Q93074 2177 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 TRBV7-9A0A0J9YWB2 115 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 IGLV1-44P01699 117 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 CGB7P0DN87 165 aa9.79□□□□□ -0.84
NEK1-201ENST00000439128 IGLV3-9A0A075B6K5 115 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 TRGV9Q99603 122 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 FOXC2Q99958 501 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 CLDN16Q9Y5I7 305 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 TGIF2-C20orf24A0A0A6YYL0 155 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
NEK1-201ENST00000439128 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
NEK1-201ENST00000439128 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
NEK1-201ENST00000439128 RBMY1A1P0DJD3 496 aaKnown RBP9.78□□□□□ -0.84
NEK1-201ENST00000439128 RBMY1CP0DJD4 496 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 LINC00477Q96M19 166 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 ZNF503-AS2A6NEH8 195 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 MPZP25189 248 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 ZNF138P52744 262 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 JOSD1Q15040 202 aaPredicted RBP9.78□□□□□ -0.84
NEK1-201ENST00000439128 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 LINC00862A6NCI5 91 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 TOMM40O96008 361 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
NEK1-201ENST00000439128 CCL24O00175 119 aa9.77□□□□□ -0.84
NEK1-201ENST00000439128 IFITM3Q01628 133 aa9.77□□□□□ -0.84
NEK1-201ENST00000439128 C9orf66Q5T8R8 295 aa9.77□□□□□ -0.84
NEK1-201ENST00000439128 ELANEP08246 267 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.85
NEK1-201ENST00000439128 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 A0A1B0GW15 77 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 NDUFA3O95167 84 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
NEK1-201ENST00000439128 EVI2AP22794 236 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 ZNF581Q9P0T4 197 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.77□□□□□ -0.85
NEK1-201ENST00000439128 J3QRE1 110 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 NDUFB8O95169 186 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 ZNF843Q8N446 348 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
NEK1-201ENST00000439128 NBASA2RRP1 2371 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 HIGD1CA8MV81 97 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 TRGC2P03986 189 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 CBLN1P23435 193 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 SUPT4H1P63272 117 aaKnown RBP9.76□□□□□ -0.85
NEK1-201ENST00000439128 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
NEK1-201ENST00000439128 RNF144BQ7Z419 303 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 CACNA1HO95180 2353 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.76□□□□□ -0.85
NEK1-201ENST00000439128 NAPSAO96009 420 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 IGHV4-38-2P0DP08 117 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 ZNF876PQ49A33 203 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 TRBV9A0A0B4J1U6 114 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 SLC25A20O43772 301 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 FOLR2P14207 255 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 LINC00469Q8N7U9 141 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 Q8TAT8 98 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 HEATR1Q9H583 2144 aaKnown RBP9.76□□□□□ -0.85
NEK1-201ENST00000439128 GBF1Q92538 1859 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 C10orf105Q8TEF2 133 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 TRAV9-2A0A087WT02 112 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 PAX9P55771 341 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 RNASE7Q9H1E1 156 aaKnown RBP9.76□□□□□ -0.85
NEK1-201ENST00000439128 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
NEK1-201ENST00000439128 FER1L5A0AVI2 2057 aa9.75□□□□□ -0.85
NEK1-201ENST00000439128 SPTBN1Q01082 2364 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms