RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 POLR2GP62487 172 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMC1A-203ENST00000428014 SPANXN5Q5MJ07 72 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 LILRB2Q8N423 598 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 TMEM217Q8N7C4 229 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 RNF183Q96D59 192 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 CSTL1Q9H114 145 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 C11orf1Q9H5F2 150 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 PSENENQ9NZ42 101 aa6.75□□□□□ -1.33
SMC1A-203ENST00000428014 RCL1Q9Y2P8 373 aaKnown RBP6.75□□□□□ -1.33
SMC1A-203ENST00000428014 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 ISLRO14498 428 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 ZNF207O43670 478 aaKnown RBP6.74□□□□□ -1.33
SMC1A-203ENST00000428014 MBPP02686 304 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-203ENST00000428014 APOHP02749 345 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-203ENST00000428014 IAPPP10997 89 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 PSMB3P49720 205 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 ATP6V1FQ16864 119 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 VWC2Q2TAL6 325 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 TEPPQ6URK8 271 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 GSG1LQ6UXU4 331 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 SIGLEC15Q6ZMC9 328 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 ACOT7LQ6ZUV0 252 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 OR1B1Q8NGR6 318 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 OVOL2Q9BRP0 275 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 C1QTNF4Q9BXJ3 329 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 NMES1Q9C002 83 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 CLEC5AQ9NY25 188 aa6.74□□□□□ -1.33
SMC1A-203ENST00000428014 TRAV6A0A075B6T7 132 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 INMT-MINDY4F8WBC2 141 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 SPRY2O43597 315 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 MPDU1O75352 247 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 CXCL2P19875 107 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 S100A11P31949 105 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 ID1P41134 155 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
SMC1A-203ENST00000428014 CASC10Q5T4H9 136 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
SMC1A-203ENST00000428014 ZNF546Q86UE3 836 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 ASB13Q8WXK3 278 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 MAGT1Q9H0U3 335 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 WFDC10AQ9H1F0 79 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 C11orf68Q9H3H3 251 aaKnown RBP6.73□□□□□ -1.33
SMC1A-203ENST00000428014 LYRM2Q9NU23 88 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-203ENST00000428014 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
SMC1A-203ENST00000428014 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 A8MTW9 85 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 SOCS3O14543 225 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 SSSCA1O60232 199 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 LYL1P12980 280 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
SMC1A-203ENST00000428014 GALR1P47211 349 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 SULT1A1P50225 295 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 HBG1P69891 147 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 HBG2P69892 147 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 ZNF90Q03938 601 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 AKR1C1Q04828 323 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 BAXQ07812 192 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 RAB31Q13636 194 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 CYP2G1PQ6ZSU1 146 aa6.72□□□□□ -1.33
SMC1A-203ENST00000428014 A0A087X0K7 114 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 ZNF98A6NK75 572 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 L7N2F9 121 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 RLN2P04090 185 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 PET100P0DJ07 73 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 DEFB131AP59861 70 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 RAP2BP61225 183 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 RPL11P62913 178 aaKnown RBP6.71□□□□□ -1.34
SMC1A-203ENST00000428014 VAMP2P63027 116 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 STX12Q86Y82 276 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 STHQ8IWL8 128 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 OR8I2Q8N0Y5 310 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 STXBP6Q8NFX7 210 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 TMEM147Q9BVK8 224 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 HRH4Q9H3N8 390 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
SMC1A-203ENST00000428014 IGHV3OR16-13A0A075B7E8 117 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 IGHV3-74A0A0B4J1X5 117 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 C5orf51A6NDU8 294 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-203ENST00000428014 E5RGE8 158 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 H3BP45 60 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 H3BRN7 92 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 HYPMO75409 117 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 METTL15P1P0C7V9 234 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 HLA-DRB4P13762 266 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 MIFP14174 115 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 RPL29P47914 159 aaKnown RBP6.7□□□□□ -1.34
SMC1A-203ENST00000428014 TCTAP57738 103 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 LYZP61626 148 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 Q6ZNX1 250 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 TMEM252Q8N6L7 170 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 NEU1Q99519 415 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 SEC22CQ9BRL7 303 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 SLC25A31Q9H0C2 315 aa6.7□□□□□ -1.34
SMC1A-203ENST00000428014 KCNIP2Q9NS61 270 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms