RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TNFSF4P23510 183 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 FOXE3Q13461 319 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 RTL8BQ17RB0 113 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 TIMM23BQ5SRD1 257 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.52□□□□□ -0.56
MSH5-206ENST00000423982 OR1L8Q8NGR8 309 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 GTSF1Q8WW33 167 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.56
MSH5-206ENST00000423982 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
MSH5-206ENST00000423982 FSTL3O95633 263 aa11.52□□□□□ -0.57
MSH5-206ENST00000423982 ORM2P19652 201 aa11.52□□□□□ -0.57
MSH5-206ENST00000423982 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
MSH5-206ENST00000423982 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
MSH5-206ENST00000423982 HRNRQ86YZ3 2850 aaPredicted RBP11.52□□□□□ -0.57
MSH5-206ENST00000423982 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 IGHV2-70DA0A0C4DH43 119 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 OR2J3O76001 311 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 C19orf24Q9BVV8 132 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
MSH5-206ENST00000423982 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 NUDT3O95989 172 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
MSH5-206ENST00000423982 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
MSH5-206ENST00000423982 ASCL2Q99929 193 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 PGPA6NDG6 321 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 TOX4O94842 621 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 CCL3L1P16619 93 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 CFHR2P36980 270 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 ETFRF1Q6IPR1 90 aa11.51□□□□□ -0.57
MSH5-206ENST00000423982 CBY3A6NI87 242 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 RASL11AQ6T310 242 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 MUC21A0A0G2JKD1 596 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 MUC21A0A140T8X8 626 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
MSH5-206ENST00000423982 MZT1Q08AG7 82 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 MUC21Q5SSG8 566 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
MSH5-206ENST00000423982 GAL3ST2Q9H3Q3 398 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
MSH5-206ENST00000423982 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
MSH5-206ENST00000423982 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 SYS1-DBNDD2H3BUS1 97 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 K7EP13 123 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 THBDP07204 575 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 ERHP84090 104 aaKnown RBP11.49□□□□□ -0.57
MSH5-206ENST00000423982 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 OR1B1Q8NGR6 318 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
MSH5-206ENST00000423982 TAX1BP3O14907 124 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 SNAI2O43623 268 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 HBBP68871 147 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 RITA1Q96K30 269 aa11.49□□□□□ -0.57
MSH5-206ENST00000423982 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
MSH5-206ENST00000423982 ZNF430Q9H8G1 570 aaPredicted RBP11.49□□□□□ -0.57
MSH5-206ENST00000423982 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 C22orf46C9J442 243 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 CSN3P07498 182 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 MYCNOSP40205 109 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 HCP5Q6MZN7 132 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 PSG1P11464 419 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 TMEM177Q53S58 311 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 PDPNQ86YL7 162 aa11.48□□□□□ -0.57
MSH5-206ENST00000423982 CSMD2Q7Z408 3487 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 A0A087X0K7 114 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
MSH5-206ENST00000423982 CDKN1BP46527 198 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 CACNG8Q8WXS5 425 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
MSH5-206ENST00000423982 CD40P25942 277 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
MSH5-206ENST00000423982 BVES-AS1Q5T3Y7 98 aa11.47□□□□□ -0.57
MSH5-206ENST00000423982 FCN3O75636 299 aa11.46□□□□□ -0.57
MSH5-206ENST00000423982 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
MSH5-206ENST00000423982 LDLRAD2Q5SZI1 272 aa11.46□□□□□ -0.57
MSH5-206ENST00000423982 FAM222BQ8WU58 562 aa11.46□□□□□ -0.57
MSH5-206ENST00000423982 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
MSH5-206ENST00000423982 BPIFB3P59826 476 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 CCL8P80075 99 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.58
MSH5-206ENST00000423982 LRRC10Q5BKY1 277 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.58
MSH5-206ENST00000423982 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms