RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PPIAL4FP0DN26 164 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 IGHV1-8P0DP01 117 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 OR4A5Q8NH83 315 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 RPH3ALQ9UNE2 315 aa7.85□□□□□ -1.15
SS18-203ENST00000415083 C20orf202A1L168 122 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 PGPA6NDG6 321 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 RNASEKQ6P5S7 137 aaKnown RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 C16orf54Q6UWD8 224 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 MCRIP2Q9BUT9 160 aaKnown RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 WASHC3Q9Y3C0 194 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 TIMM8BQ9Y5J9 83 aaPredicted RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 ZFHX2Q9C0A1 2572 aaPredicted RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 E7EQL1 145 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 LYNX1G3V0Z9 82 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 LYNX1P0DP58 116 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 PRR30Q53SZ7 412 aaPredicted RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 OR10X1Q8NGY0 326 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
SS18-203ENST00000415083 ZNF331Q9NQX6 463 aaPredicted RBP7.84□□□□□ -1.15
SS18-203ENST00000415083 IGLV1-47P01700 117 aa7.84□□□□□ -1.16
SS18-203ENST00000415083 IGLL1P15814 213 aa7.84□□□□□ -1.16
SS18-203ENST00000415083 FAM71F2Q6NXP2 309 aa7.84□□□□□ -1.16
SS18-203ENST00000415083 SSX8Q7RTT4 187 aa7.84□□□□□ -1.16
SS18-203ENST00000415083 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.16
SS18-203ENST00000415083 HSBP1O75506 76 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 TNFSF4P23510 183 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 FOXA3P55318 350 aaPredicted RBP7.83□□□□□ -1.16
SS18-203ENST00000415083 RASL11AQ6T310 242 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 TMEM186Q96B77 213 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 POLEQ07864 2286 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 NKX6-3A6NJ46 265 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 NPIPB6E9PJ23 425 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 TSPOP30536 169 aa7.83□□□□□ -1.16
SS18-203ENST00000415083 RNASE6Q93091 150 aaKnown RBP7.83□□□□□ -1.16
SS18-203ENST00000415083 H0Y8G0 127 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 M0R2Z0 102 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 TMEM108Q6UXF1 575 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 CIARTQ8N365 385 aaPredicted RBP7.82□□□□□ -1.16
SS18-203ENST00000415083 OR1L4Q8NGR5 311 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 TRGV9Q99603 122 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 C16orf97H3BN30 126 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 TOMM40O96008 361 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 ZNF138P52744 262 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 RNF151Q2KHN1 245 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 ZNF575Q86XF7 245 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 OR2D3Q8NGH3 330 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 Q9H3A6 140 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 KAAG1Q9UBP8 84 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 I3L2K1 104 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 TCRAP04437 139 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
SS18-203ENST00000415083 TNFRSF1AP19438 455 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 PLP1P60201 277 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 COX19Q49B96 90 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 SH3BGRL2Q9UJC5 107 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 RNF24Q9Y225 148 aa7.82□□□□□ -1.16
SS18-203ENST00000415083 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 IGLC1P0CG04 106 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 CRIP1P50238 77 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 GPR82Q96P67 336 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 TMEM133Q9H2Q1 129 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 IGHV2-26A0A0B4J1V2 119 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 PSG1P11464 419 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
SS18-203ENST00000415083 SELENOKQ9Y6D0 94 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 ACACAQ13085 2346 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 LY6LH3BQJ8 138 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 MRPS12O15235 138 aaKnown RBP7.81□□□□□ -1.16
SS18-203ENST00000415083 NDUFB3O43676 98 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 ENSAO43768 121 aaKnown RBP7.81□□□□□ -1.16
SS18-203ENST00000415083 IGKV1-17P01599 117 aa7.81□□□□□ -1.16
SS18-203ENST00000415083 RPL19P84098 196 aaKnown RBP7.81□□□□□ -1.16
SS18-203ENST00000415083 IGHV1-3A0A0C4DH29 117 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 CRXO43186 299 aaPredicted RBP7.8□□□□□ -1.16
SS18-203ENST00000415083 PAX2Q02962 417 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 Q86TA4 180 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 ZNF414Q96IQ9 312 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 ZNF835Q9Y2P0 537 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 TOX4O94842 621 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 BPIFB3P59826 476 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 TEX45Q8NA69 505 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 C8orf46Q8TAG6 207 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 PERPQ96FX8 193 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 ABHD17AQ96GS6 310 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 F11RQ9Y624 299 aaKnown RBP7.8□□□□□ -1.16
SS18-203ENST00000415083 KLHDC1Q8N7A1 406 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 ZC2HC1AQ96GY0 325 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 FBXL15Q9H469 300 aa7.8□□□□□ -1.16
SS18-203ENST00000415083 ZNF492Q9P255 531 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms