RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 MBD3L3A6NE82 208 aaPredicted RBP13.66□□□□□ -0.22
TSC2-204ENST00000401874 MBD3L5A6NJ08 208 aaPredicted RBP13.66□□□□□ -0.22
TSC2-204ENST00000401874 ZNF815PA8K554 130 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 MBD3L2Q8NHZ7 208 aaPredicted RBP13.66□□□□□ -0.22
TSC2-204ENST00000401874 TOMM40O96008 361 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 CNTFRP26992 372 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 ZNF329Q86UD4 541 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 ZNF479Q96JC4 524 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 SAMD5Q5TGI4 173 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 MINOS1Q5TGZ0 78 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 MINOS1-NBL1R4GNA1 71 aa13.66□□□□□ -0.22
TSC2-204ENST00000401874 TRGV11A0A075B6L2 103 aa13.65□□□□□ -0.22
TSC2-204ENST00000401874 PSG3Q16557 428 aa13.65□□□□□ -0.22
TSC2-204ENST00000401874 Q0VG73 95 aa13.65□□□□□ -0.22
TSC2-204ENST00000401874 TGFAP01135 160 aa13.65□□□□□ -0.23
TSC2-204ENST00000401874 PF4P02776 101 aa13.65□□□□□ -0.23
TSC2-204ENST00000401874 JMJD8Q96S16 334 aa13.65□□□□□ -0.23
TSC2-204ENST00000401874 GFRA4Q9GZZ7 299 aa13.65□□□□□ -0.23
TSC2-204ENST00000401874 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.23
TSC2-204ENST00000401874 TRAV41A0A0B4J266 112 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 WNT2P09544 360 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 NPFFR1Q9GZQ6 430 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 RNF182Q8N6D2 247 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
TSC2-204ENST00000401874 C15orf32Q32M92 178 aa13.64□□□□□ -0.23
TSC2-204ENST00000401874 SH2D1AO60880 128 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 HS3ST6Q96QI5 342 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 SIGLEC9Q9Y336 463 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 LINC00205P59089 165 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 TP53BP1Q12888 1972 aaPredicted RBP13.63□□□□□ -0.23
TSC2-204ENST00000401874 LMO1P25800 156 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 RPL15P61313 204 aaKnown RBP13.63□□□□□ -0.23
TSC2-204ENST00000401874 PRSS22Q9GZN4 317 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 NCR2O95944 276 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 PAX9P55771 341 aa13.63□□□□□ -0.23
TSC2-204ENST00000401874 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
TSC2-204ENST00000401874 TRAV8-2A0A0B4J237 113 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 RBMY1BA6NDE4 496 aaKnown RBP13.62□□□□□ -0.23
TSC2-204ENST00000401874 RBMY1EA6NEQ0 496 aaKnown RBP13.62□□□□□ -0.23
TSC2-204ENST00000401874 BUB1B-PAK6H3BSN5 160 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 RBMY1DP0C7P1 496 aaKnown RBP13.62□□□□□ -0.23
TSC2-204ENST00000401874 RBMY1A1P0DJD3 496 aaKnown RBP13.62□□□□□ -0.23
TSC2-204ENST00000401874 RBMY1CP0DJD4 496 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 VMO1Q7Z5L0 202 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 SDK2Q58EX2 2172 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 M0R1W7 72 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 ZNF138P52744 262 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 GUSBP1Q15486 140 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
TSC2-204ENST00000401874 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 VDAC2P45880 294 aaPredicted RBP13.61□□□□□ -0.23
TSC2-204ENST00000401874 PLNP26678 52 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 Q86TA4 180 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 SIGMAR1Q99720 223 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 TRBV7-9A0A0J9YWB2 115 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 CD28P10747 220 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 GAGE13Q4V321 117 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
TSC2-204ENST00000401874 NLRC5Q86WI3 1866 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
TSC2-204ENST00000401874 TRAV2A0A0B4J234 112 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 LURAP1LQ8IV03 231 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 TDGF1P3P51864 188 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 A8MWP6 167 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 DMRTC2Q8IXT2 367 aaPredicted RBP13.6□□□□□ -0.23
TSC2-204ENST00000401874 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
TSC2-204ENST00000401874 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 A8MWV9 139 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 BCL6BQ8N143 479 aaPredicted RBP13.59□□□□□ -0.23
TSC2-204ENST00000401874 C20orf144Q9BQM9 153 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 ZNF492Q9P255 531 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
TSC2-204ENST00000401874 SPACA3Q8IXA5 215 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
TSC2-204ENST00000401874 KIR3DL3Q8N743 410 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 IGHV4-39P01824 125 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 PAX2Q02962 417 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 MPV17L2Q567V2 206 aa13.59□□□□□ -0.23
TSC2-204ENST00000401874 PTPRDP23468 1912 aa13.58□□□□□ -0.23
TSC2-204ENST00000401874 SFTA2Q6UW10 78 aa13.58□□□□□ -0.23
TSC2-204ENST00000401874 NCOR1P1Q9H4R4 102 aa13.58□□□□□ -0.23
TSC2-204ENST00000401874 NDUFS6O75380 124 aaKnown RBP13.58□□□□□ -0.24
TSC2-204ENST00000401874 IGKV1-16P04430 117 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 KLF17Q5JT82 389 aaPredicted RBP13.58□□□□□ -0.24
TSC2-204ENST00000401874 STHQ8IWL8 128 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 LIME1Q9H400 295 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 KLRD1Q13241 179 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 POLR3KQ9Y2Y1 108 aaPredicted RBP13.58□□□□□ -0.24
TSC2-204ENST00000401874 A0A0G2JNJ9 132 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 EFNA4P52798 201 aa13.58□□□□□ -0.24
TSC2-204ENST00000401874 UBE2V1Q13404 147 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms