RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ZNF320A2RRD8 509 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 I3L521 148 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 UNQ9165/PRO28630Q6UXU0 137 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 C8orf86Q6ZUL3 223 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 PRIMA1Q86XR5 153 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 IQCF2Q8IXL9 164 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 GATAD1Q8WUU5 269 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 CTXND1A0A1B0GTU2 59 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 MAP1LC3B2A6NCE7 125 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 KRTAP10-3P60369 221 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 RPEL1Q2QD12 228 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 C4orf3Q8WVX3 66 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 MAP1LC3BQ9GZQ8 125 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 ZFAND3Q9H8U3 227 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 FUT9Q9Y231 359 aa16.28■□□□□ 0.2
CPNE1-204ENST00000397443 ELOA3CA0A087WX78 387 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-204ENST00000397443 SEC14L6B5MCN3 397 aa16.27■□□□□ 0.2
CPNE1-204ENST00000397443 PLP1P60201 277 aa16.27■□□□□ 0.2
CPNE1-204ENST00000397443 TENM1Q9UKZ4 2725 aa16.27■□□□□ 0.2
CPNE1-204ENST00000397443 WNK1Q9H4A3 2382 aa16.27■□□□□ 0.19
CPNE1-204ENST00000397443 IGHV3OR16-13A0A075B7E8 117 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 IGHV3-49A0A0A0MS15 119 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 IGHV3-74A0A0B4J1X5 117 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 FOXL1Q12952 345 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 OR11H1Q8NG94 326 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 SCRT1Q9BWW7 348 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 SLC25A39Q9BZJ4 359 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-204ENST00000397443 TMPRSS5Q9H3S3 457 aa16.26■□□□□ 0.19
CPNE1-204ENST00000397443 MRPL27Q9P0M9 148 aaKnown RBP16.26■□□□□ 0.19
CPNE1-204ENST00000397443 TSSC4Q9Y5U2 329 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-204ENST00000397443 CCL20P78556 96 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 C19orf24Q9BVV8 132 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 RABAC1Q9UI14 185 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 IGHV3-66A0A0C4DH42 116 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 A0A1B0GUS0 222 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 NDUFA4O00483 81 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 HSPB1P04792 205 aaKnown RBP16.25■□□□□ 0.19
CPNE1-204ENST00000397443 SNRPCP09234 159 aaKnown RBP16.25■□□□□ 0.19
CPNE1-204ENST00000397443 ARL14EPLP0DKL9 152 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 NSUN5P1Q3KNT7 163 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 KRTAP24-1Q3LI83 254 aa16.25■□□□□ 0.19
CPNE1-204ENST00000397443 OR7C2O60412 319 aa16.24■□□□□ 0.19
CPNE1-204ENST00000397443 HOXD3P31249 432 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-204ENST00000397443 MBD3L1Q8WWY6 194 aa16.24■□□□□ 0.19
CPNE1-204ENST00000397443 DPF1Q92782 380 aa16.24■□□□□ 0.19
CPNE1-204ENST00000397443 SLURP1P55000 103 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 OR1N2Q8NGR9 330 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 RNF2Q99496 336 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 SLC25A2Q9BXI2 301 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 MRPL32Q9BYC8 188 aaKnown RBP16.23■□□□□ 0.19
CPNE1-204ENST00000397443 TECRQ9NZ01 308 aaKnown RBP16.23■□□□□ 0.19
CPNE1-204ENST00000397443 OR10J4P0C629 311 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 C8orf88P0DMB2 117 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 SYNJ2BPP57105 145 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 FAM106AQ4KMX7 169 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 AWAT1Q58HT5 328 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 WFDC12Q8WWY7 111 aa16.23■□□□□ 0.19
CPNE1-204ENST00000397443 LINC01619G3V211 115 aa16.22■□□□□ 0.19
CPNE1-204ENST00000397443 APOHP02749 345 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-204ENST00000397443 STAG3L2P0CL84 134 aa16.22■□□□□ 0.19
CPNE1-204ENST00000397443 STAG3L3P0CL85 134 aa16.22■□□□□ 0.19
CPNE1-204ENST00000397443 METTL26Q96S19 204 aa16.22■□□□□ 0.19
CPNE1-204ENST00000397443 SHANK2-AS3Q9BTD1 123 aa16.22■□□□□ 0.19
CPNE1-204ENST00000397443 H3BRN7 92 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 PYYP10082 97 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 TAS2R45P59539 299 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 TM4SF20Q53R12 229 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 TMEM190Q8WZ59 177 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 RAX2Q96IS3 184 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 FAM167A-AS1Q96KT0 104 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 FBN1P35555 2871 aaKnown RBP16.21■□□□□ 0.19
CPNE1-204ENST00000397443 HBE1P02100 147 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 NPPCP23582 126 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 KHDC3LQ587J8 217 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 SLC7A5P1Q8MH63 180 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 PFDN2Q9UHV9 154 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 SELENOKQ9Y6D0 94 aa16.21■□□□□ 0.19
CPNE1-204ENST00000397443 ZNF98A6NK75 572 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 EDN2P20800 178 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 IL34Q6ZMJ4 242 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 GPHB5Q86YW7 130 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 LYPD6BQ8NI32 183 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 GNG13Q9P2W3 67 aa16.2■□□□□ 0.18
CPNE1-204ENST00000397443 CXorf1O96002 111 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 ZP3P21754 424 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 ZNF503Q96F45 646 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 TRAV1-1A0A0B4J248 108 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 COMMD7Q86VX2 200 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 PAXXQ9BUH6 204 aa16.19■□□□□ 0.18
CPNE1-204ENST00000397443 ADARB2-AS1A8MUL3 147 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 H3BTX0 84 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 CCL24O00175 119 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 GCHFRP30047 84 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 HAGHQ16775 308 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 OR51M1Q9H341 326 aa16.18■□□□□ 0.18
CPNE1-204ENST00000397443 DAZ1Q9NQZ3 744 aaKnown RBP16.18■□□□□ 0.18
CPNE1-204ENST00000397443 UBE2G2P60604 165 aa16.17■□□□□ 0.18
CPNE1-204ENST00000397443 UBE2L3P68036 154 aaKnown RBP16.17■□□□□ 0.18
CPNE1-204ENST00000397443 S100A7AQ86SG5 101 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms