RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 PATE2Q6UY27 113 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 Q71RC1 249 aaPredicted RBP14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 LINC01006Q8NI28 216 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 SHANK2-AS3Q9BTD1 123 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 SLC25A39Q9BZJ4 359 aaPredicted RBP14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 TMEM14CQ9P0S9 112 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 S4R3C0 116 aa14.7□□□□□ -0.06
TSPAN4-204ENST00000397404 RBFOX3A6NFN3 312 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 ARL14EPLP0DKL9 152 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 GUK1Q16774 197 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 FAM106AQ4KMX7 169 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 C1orf194Q5T5A4 169 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 TOMM20LQ6UXN7 152 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 GPHB5Q86YW7 130 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 EIF5A2Q9GZV4 153 aaKnown RBP14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 CLPSL1A2RUU4 121 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 H3BRN7 92 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 RPLP1P05386 114 aaKnown RBP14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 CD5P06127 495 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 BCL2P10415 239 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 BMI1P35226 326 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 DEFA5Q01523 94 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 ZNF506Q5JVG8 444 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 MIR17HGQ75NE6 70 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 SSX7Q7RTT5 188 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 BPIFA4PQ86YQ2 179 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 METTL26Q96S19 204 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 ZFAND3Q9H8U3 227 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 DOK5Q9P104 306 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 VAX2Q9UIW0 290 aa14.69□□□□□ -0.06
TSPAN4-204ENST00000397404 KRBOX1C9JBD0 128 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 OR7C2O60412 319 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 HSPB1P04792 205 aaKnown RBP14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 ZP3P21754 424 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 GCHFRP30047 84 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 SLC7A5P1Q8MH63 180 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 C4orf3Q8WVX3 66 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 TCEAL7Q9BRU2 100 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 OR51M1Q9H341 326 aa14.68□□□□□ -0.06
TSPAN4-204ENST00000397404 K7EMT4 169 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 RPL7P18124 248 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 MEOX2P50222 304 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 FGF8P55075 233 aaPredicted RBP14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 FAM167A-AS1Q96KT0 104 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 PAXXQ9BUH6 204 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 SLC25A2Q9BXI2 301 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 GNG13Q9P2W3 67 aa14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 FN1P02751 2386 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-204ENST00000397404 A0A1W2PS18 150 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 ZNF98A6NK75 572 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 IGHV3-11P01762 117 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 NPPCP23582 126 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 USF2Q15853 346 aaPredicted RBP14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 CITED4Q96RK1 184 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 RNF114Q9Y508 228 aa14.66□□□□□ -0.06
TSPAN4-204ENST00000397404 A0A1W2PRE2 83 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 ATP6V1G1O75348 118 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 CRYBB3P26998 211 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 CCL20P78556 96 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 RPEL1Q2QD12 228 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 TOR2AQ5JU69 321 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 SPATA31B1PQ5VZV4 182 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 IQCF2Q8IXL9 164 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 UHRF2Q96PU4 802 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 TMEM231Q9H6L2 316 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 UFC1Q9Y3C8 167 aa14.65□□□□□ -0.06
TSPAN4-204ENST00000397404 LOC102723971A0A1B0GUV8 181 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 PPP5D1E7EU14 171 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 I3L521 148 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 LGALS9O00182 355 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 HMGB3O15347 200 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 PDE6DO43924 150 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 UBE2L3P68036 154 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 MEF2BQ02080 365 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 PDE6HQ13956 83 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 OR4F17Q8NGA8 305 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 GRAMD2BQ96HH9 432 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 OR4F4Q96R69 305 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 ELOVL1Q9BW60 279 aa14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 TSSC4Q9Y5U2 329 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-204ENST00000397404 A0A1B0GV50 99 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 TMEM250H0YL14 139 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 HIST1H1EP10412 219 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 FOXL1Q12952 345 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 REC114Q7Z4M0 266 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 SLC35B3Q9H1N7 401 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 TREM1Q9NP99 234 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 DAZ1Q9NQZ3 744 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 NF1P21359 2839 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 GP9P14770 177 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 PROK1P58294 105 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 C10orf99Q6UWK7 81 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 SCRT1Q9BWW7 348 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 U3KQE9 123 aa14.63□□□□□ -0.07
TSPAN4-204ENST00000397404 A8MWP6 167 aa14.62□□□□□ -0.07
TSPAN4-204ENST00000397404 F6UZH7 168 aa14.62□□□□□ -0.07
TSPAN4-204ENST00000397404 BUB3O43684 328 aa14.62□□□□□ -0.07
TSPAN4-204ENST00000397404 LCNL1Q6ZST4 164 aa14.62□□□□□ -0.07
TSPAN4-204ENST00000397404 TMEM218A2RU14 115 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 2014.9 ms