RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CDC42P60953 191 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 C8orf74Q6P047 294 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR10J5Q8NHC4 309 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 TEX47Q8TBZ9 253 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 DDI1Q8WTU0 396 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 GPR146Q96CH1 333 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 DCSTAMPQ9H295 470 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 OSTCQ9NRP0 149 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 VPS29Q9UBQ0 182 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 CNTRLQ7Z7A1 2325 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 ZZEF1O43149 2961 aa0.45□□□□□ -2.34
RNU6-48P-201ENST00000384161 MYH7BA7E2Y1 1941 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 ADGRG4Q8IZF6 3080 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 DOCK3Q8IZD9 2030 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR4C46A6NHA9 309 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 CHP2O43745 196 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 LYZL6O75951 148 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 TTRP02766 147 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 SMIM10L2AP0DMW4 78 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 SMIM10L2BP0DMW5 78 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 MGST1P10620 155 aaKnown RBP0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 IMPG1Q17R60 797 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 MPV17LQ2QL34 196 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 C1orf137Q5JT78 98 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 SOSTDC1Q6X4U4 206 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR6V1Q8N148 313 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 KRT222Q8N1A0 295 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 BORCS7Q96B45 105 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 PPP1R2P1Q96PQ5 205 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 AMELYQ99218 206 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 CMSS1Q9BQ75 279 aaKnown RBP0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 CCDC90BQ9GZT6 254 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 MRPL27Q9P0M9 148 aaKnown RBP0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 EPDR1Q9UM22 224 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 KIAA1549Q9HCM3 1950 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.44□□□□□ -2.343e-10■■■■□ 25.7
RNU6-48P-201ENST00000384161 NCOA1Q15788 1441 aa0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 SPENQ96T58 3664 aaKnown RBP0.44□□□□□ -2.34
RNU6-48P-201ENST00000384161 PTPRZ1P23471 2315 aaPredicted RBP0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 TGIF2-C20orf24A0A0A6YYL0 155 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 TRAV26-2A0A0B4J265 109 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 J3QRK9 145 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR2J2O76002 312 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR4E1P0C645 316 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 OMPP47874 163 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 AP3S2P59780 193 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 RPS20P60866 119 aaKnown RBP0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 RNASE10Q5GAN6 216 aaKnown RBP0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 C3orf56Q8N813 242 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 OR13D1Q8NGV5 346 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 C2orf50Q96LR7 162 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 CYSLTR1Q9Y271 337 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 SPTBN2O15020 2390 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 OBSL1O75147 1896 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 E9PCH4 1651 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 KDM5AP29375 1690 aaKnown RBP0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 KIF1BO60333 1816 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 CASP8AP2Q9UKL3 1982 aa0.43□□□□□ -2.34
RNU6-48P-201ENST00000384161 RIMBP3CA6NJZ7 1639 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 RIMBP3BA6NNM3 1639 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 HECW1Q76N89 1606 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 RIMBP3Q9UFD9 1639 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 A0A087X0T9 212 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 CLDN24A6NM45 220 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 ZNF736B4DX44 427 aaPredicted RBP0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 CASP1P29466 404 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 ANP32AP39687 249 aaKnown RBP0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 CNBPP62633 177 aaKnown RBP0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 LINC01554Q52M75 96 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 PTRHD1Q6GMV3 140 aaKnown RBP0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 CLDN22Q8N7P3 220 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 BORCS5Q969J3 196 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 RNF122Q9H9V4 155 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 C14orf132Q9NPU4 83 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 PKIGQ9Y2B9 76 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 NOSIPQ9Y314 301 aaKnown RBP0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 ATMQ13315 3056 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 RTL1A6NKG5 1358 aa0.42□□□□□ -2.34
RNU6-48P-201ENST00000384161 MYO3BQ8WXR4 1341 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 CHD7Q9P2D1 2997 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 TRIOO75962 3097 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 A0A1W2PPM0 123 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 PPIBP23284 216 aaKnown RBP0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 CEBPGP53567 150 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 TSNQ15631 228 aaKnown RBP0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 ESRGQ1W209 222 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 IAH1Q2TAA2 248 aaPredicted RBP0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 BRMS1LQ5PSV4 323 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 TEX261Q6UWH6 196 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 LCA10Q71F78 164 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 LINC00301Q8NCQ3 95 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 CT55Q8WUE5 264 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 C8orf76Q96K31 380 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 HIST1H2BLQ99880 126 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 TMEM70Q9BUB7 260 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 CDC42SE1Q9NRR8 79 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 U3KQ87 197 aa0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 V9GYY5 206 aaPredicted RBP0.41□□□□□ -2.34
RNU6-48P-201ENST00000384161 ROBO3Q96MS0 1386 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms