RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 SLC25A6P12236 298 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 OR2F1Q13607 317 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 SPATA31B1PQ5VZV4 182 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 OR8I2Q8N0Y5 310 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 TOMM5Q8N4H5 51 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 TRIM63Q969Q1 353 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 KIAA1109Q2LD37 5005 aa12.39□□□□□ -0.43
HMGN1-204ENST00000380749 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 ZNF705FA8MVS1 300 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-204ENST00000380749 ISLRO14498 428 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 SOCS3O14543 225 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-204ENST00000380749 ZNF705DP0CH99 300 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-204ENST00000380749 ZNF705BP0CI00 300 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-204ENST00000380749 P0DMU3 169 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 MEOX2P50222 304 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 DEFB1P60022 68 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
HMGN1-204ENST00000380749 PYDC2Q56P42 97 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 LRTM2Q8N967 370 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 CLUHP3Q96NS8 147 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 TMED3Q9Y3Q3 217 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
HMGN1-204ENST00000380749 IGHV3OR16-12A0A075B7B8 117 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 SPART-AS1P0CW21 52 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 EMP1P54849 157 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 FXYD7P58549 80 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 EBLN2Q6P2I7 272 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 THAP8Q8NA92 274 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 DEDD2Q8WXF8 326 aa12.37□□□□□ -0.43
HMGN1-204ENST00000380749 SLC25A21Q9BQT8 299 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-204ENST00000380749 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 PKD1P98161 4303 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 GALR1P47211 349 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 PAX9P55771 341 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 RPRMQ9NS64 109 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
HMGN1-204ENST00000380749 IGKV1OR2-108A0A075B7D4 117 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 SYNGR2O43760 224 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 S100A7P31151 101 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 ZNF79Q15937 498 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 ZNF709Q8N972 641 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 C16orf92Q96LL3 132 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 SLC25A22Q9H936 323 aa12.35□□□□□ -0.43
HMGN1-204ENST00000380749 SFT2D2O95562 160 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 S100A5P33763 92 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 PSG9Q00887 426 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 AKR1C1Q04828 323 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 PPP1R1AQ13522 171 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 C7orf50Q9BRJ6 194 aaKnown RBP12.34□□□□□ -0.43
HMGN1-204ENST00000380749 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 SLC35B3Q9H1N7 401 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 V9GYH0 126 aa12.34□□□□□ -0.43
HMGN1-204ENST00000380749 MUC4Q99102 2169 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 WRBO00258 174 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 HBE1P02100 147 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 HOXB5P09067 269 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 SLC25A32Q9H2D1 315 aa12.33□□□□□ -0.44
HMGN1-204ENST00000380749 A0A0J9YX75 114 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 F6UB75 175 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 FAM210BQ96KR6 192 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 GPR82Q96P67 336 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 TMEM147Q9BVK8 224 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 DOK5Q9P104 306 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
HMGN1-204ENST00000380749 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 H3BP45 60 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 UBE2MP61081 183 aaKnown RBP12.31□□□□□ -0.44
HMGN1-204ENST00000380749 FAM222AQ5U5X8 452 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 UBE2DNLQ8IWF7 75 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
HMGN1-204ENST00000380749 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
HMGN1-204ENST00000380749 ORM2P19652 201 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 RSG1Q9BU20 258 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 SMCO3A2RU48 225 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 INPP1P49441 399 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 OXA1LQ15070 435 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 GSG1LQ6UXU4 331 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
HMGN1-204ENST00000380749 RYR1P21817 5038 aa12.29□□□□□ -0.44
HMGN1-204ENST00000380749 PCLOQ9Y6V0 5065 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms