RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 GGTLC3B5MD39 225 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 IGLV1-44P01699 117 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 FOXA3P55318 350 aaPredicted RBP5.84□□□□□ -1.47
CCDC171-201ENST00000380701 BRD3OSQ6XYD6 125 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 SH2D6Q7Z4S9 175 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 C1QL4Q86Z23 238 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 IL17DQ8TAD2 202 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 GFRA4Q9GZZ7 299 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 RPL23P62829 140 aaKnown RBP5.84□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM219Q86XT9 240 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 SLX1AQ9BQ83 275 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 ZNF319Q9P2F9 582 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 TRPT1Q86TN4 253 aaKnown RBP5.84□□□□□ -1.48
CCDC171-201ENST00000380701 LINC00469Q8N7U9 141 aa5.84□□□□□ -1.48
CCDC171-201ENST00000380701 MS4A6AQ9H2W1 248 aa5.84□□□□□ -1.48
CCDC171-201ENST00000380701 RAMP3O60896 148 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 C5orf30Q96GV9 206 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 ANKRD36A6QL64 1941 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 TDGF1P3P51864 188 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 KIAA1644Q3SXP7 199 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 ACTL10Q5JWF8 245 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM170AQ8WVE7 144 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF646O15015 1829 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-201ENST00000380701 RNF222A6NCQ9 220 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 KLRD1Q13241 179 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 IGFL2Q6UWQ7 119 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 COQ2Q96H96 371 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 MYMXA0A1B0GTQ4 84 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 RNF152Q8N8N0 203 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 INTS1Q8N201 2190 aaKnown RBP5.83□□□□□ -1.48
CCDC171-201ENST00000380701 DICER1Q9UPY3 1922 aaKnown RBP5.83□□□□□ -1.48
CCDC171-201ENST00000380701 SIPA1L1O43166 1804 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 THSD7BQ9C0I4 1608 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 LINC00614P0C842 121 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 DAZAP2Q15038 168 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-201ENST00000380701 C10orf126Q8N4M7 172 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 DNAJC30Q96LL9 226 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 EDA2RQ9HAV5 297 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 DMRT1Q9Y5R6 373 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 TSSC4Q9Y5U2 329 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-201ENST00000380701 LTBP1Q14766 1721 aa5.83□□□□□ -1.48
CCDC171-201ENST00000380701 SHISA3A0PJX4 238 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
CCDC171-201ENST00000380701 FOXG1P55316 489 aaPredicted RBP5.82□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF876PQ49A33 203 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM256Q8N2U0 113 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 PMS2P5A8MQ11 134 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 C1QTNF9P0C862 333 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 ATXN8Q156A1 80 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 C18orf15Q96N68 181 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 DOCK6Q96HP0 2047 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 OTOFQ9HC10 1997 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 CD24P25063 80 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 LINC00158P58513 81 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 DEFB113Q30KQ7 82 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 DMRTC2Q8IXT2 367 aaPredicted RBP5.82□□□□□ -1.48
CCDC171-201ENST00000380701 LY6G5BQ8NDX9 201 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 OVOL3O00110 214 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 IGKCP01834 107 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 PYYP10082 97 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 RNASE2P10153 161 aaKnown RBP5.82□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF833PQ6ZTB9 187 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 CT83Q5H943 113 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 C9orf66Q5T8R8 295 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 DMRTA1Q5VZB9 504 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 C11orf44Q8N8P7 122 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 ATP6V0BQ99437 205 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF492Q9P255 531 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 DOCK3Q8IZD9 2030 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 IGHV3OR16-8A0A075B7F1 116 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 NEGR1Q7Z3B1 354 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 VPREB3Q9UKI3 123 aa5.82□□□□□ -1.48
CCDC171-201ENST00000380701 LY6G6EA0A0G2JKS1 128 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 SLC17A3O00476 420 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 IGHV2-70P01814 119 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 U3KQA8 63 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM89A2RUT3 159 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 RPL35AP18077 110 aaKnown RBP5.81□□□□□ -1.48
CCDC171-201ENST00000380701 DDTP30046 118 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 SYNJ2BPP57105 145 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 SFTA2Q6UW10 78 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 AGMATQ9BSE5 352 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 RNF126Q9BV68 326 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 TSPAN13O95857 204 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 DEFB131AP59861 70 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 GNG5P63218 68 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 FCN3O75636 299 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 TRBV24-1A0A075B6N3 115 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 IGKV1-27A0A075B6S5 117 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM75Q8N9X5 138 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 C11orf68Q9H3H3 251 aaKnown RBP5.81□□□□□ -1.48
CCDC171-201ENST00000380701 DKK4Q9UBT3 224 aa5.81□□□□□ -1.48
CCDC171-201ENST00000380701 ARID1AO14497 2285 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 TRBV25-1A0A075B6N4 114 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms